Homology analysis

Gene ID At3g57230
Gene name AGL16 (AGAMOUS-LIKE 16)
Functional description MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.187e-1581At4g37940829950AGL21encodes a MADS box protein, highly expressed in the root.O.I.C.G.S.X.
0.104e-1375At3g57390824906AGL18encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.O.I.C.G.S.X.
0.164e-756At2g14210815907AGL44 (AGAMOUS-LIKE 44)MADS box gene, transcription factorO.I.C.G.S.X.
0.096e-652At4g24540828556AGL24 (AGAMOUS-LIKE 24)Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.O.I.C.G.S.X.
0.052e-550At5g60910836212AGL8 (agamous-like 8)MADS box gene negatively regulated by APETALA1O.I.C.G.S.X.
0.072e-550At2g22630816794AGL17 (agamous-like 17)Encodes a MADs domain containing protein involved in promoting flowering. Loss of function mutations show delayed flowering in long days and reduced levels of LFY and AP1 expression.O.I.C.G.S.X.
0.054e-446At5g15800831436SEP1 (SEPALLATA1)Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.091e-448Gma.11362.1.S1_atGlycine maxAW395011--1e-4At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.
0.052e-136Contig2198_atHordeum vulgareContig2198--3e-6At1g24260SEP3 (SEPALLATA3)O.I.C.G.S.X.
0.278e-756Os08g0431900Oryza sativaAY345220.1-Transcription factor MADS236e-6At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.
0.434e-26119PtpAffx.201979.1.S1_atPopulus trichocarpapmrna3951hypothetical protein-3e-26At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.
0.072e-240TaAffx.143995.17.A1_atTriticum aestivumAY188331--1e-3At5g60910AGL8 (agamous-like 8)O.I.C.G.S.X.
0.041e-4461609046_atVitis viniferaCB971729hypothetical protein LOC100256085-1e-13At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.C.G.S.X.
0.141e-1789Zm.524.1.S1_atZea maysAF112149.1MADS box protein 2-6e-17At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.

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