CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.12	7e-9	61	At2g43590	818961	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMV	O.I.	C.G.	S.X.
0.06	4e-7	56	At2g43580	818960	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMV	O.I.	C.G.	S.X.
0.06	2e-6	54	At3g47540	823908	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	S.X.
0.01	1e-1	38	At3g56410	824808	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVA	O.I.	C.G.	S.X.
0.05	4e-1	36	At2g43570	818959	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV	O.I.	C.G.	S.X.
0.03	4e-1	36	At2g43620	818964	chitinase, putative	F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM	O.I.	C.G.	S.X.
0.01	4e-1	36	At2g01460	814674	ATP binding / kinase	F:kinase activity, ATP binding;P:biosynthetic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	S.X.
0.01	2e+0	34	At3g48290	823987	CYP71A24	putative cytochrome P450	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.11	6e-7	56	Gma.3702.1.S1_at	Glycine max	BU578108	-	-	6e-7	At3g54420	ATEP3	O.I.	C.G.	S.X.
0.04	8e-4	44	Contig14498_at	Hordeum vulgare	Contig14498	-	-	9e-3	At2g43590	chitinase, putative	O.I.	C.G.	S.X.
0.10	5e-2	40	Os04g0493400	Oryza sativa	AB003194.1	-	Endochitinase A precursor (EC 3.2.1.14) (Seedchitinase A)	4e-2	At3g54420	ATEP3	O.I.	C.G.	S.X.
0.18	7e-13	75	PtpAffx.225260.1.S1_at	Populus trichocarpa	pmrna44483	hypothetical protein	-	4e-13	At3g54420	ATEP3	O.I.	C.G.	S.X.
0.04	1e-1	38	TaAffx.133698.1.A1_s_at	Triticum aestivum	BJ296326	-	-	1e+0	At2g43570	chitinase, putative	O.I.	C.G.	S.X.
0.14	2e-6	52	1613871_at	Vitis vinifera	CF207387	hypothetical protein LOC100256098	-	8e-6	At3g54420	ATEP3	O.I.	C.G.	S.X.
0.08	2e-1	36	Zm.1595.1.S1_at	Zea mays	CD967190	endochitinase A	-	6e-1	At3g54420	ATEP3	O.I.	C.G.	S.X.

Gene ID	At3g54420
Gene name	ATEP3
Functional description	encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.