Homology analysis

Gene ID At3g54230
Gene name nucleic acid binding / nucleotide binding / zinc ion binding
Functional description F:nucleotide binding, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOFPBAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-242At3g16280820874DNA binding / transcription factorencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.S.X.
0.014e-138At5g22340832294unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POO.I.C.G.S.X.
0.014e-138At4g15610827238integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.014e-138At1g69450843277-F:unknown;P:unknown;C:endomembrane system, membrane;FPMOO.I.C.G.S.X.
0.012e+036At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAO.I.C.G.S.X.
0.012e+036At5g30510833138RPS1 (RIBOSOMAL PROTEIN S1)F:structural constituent of ribosome, RNA binding;P:translation;C:thylakoid, chloroplast stroma, chloroplast, membrane;BOPMFAO.I.C.G.S.X.
0.002e+036At4g31160829244DCAF1 (DDB1-CUL4 ASSOCIATED FACTOR 1)Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.019e-344GmaAffx.3024.1.A1_atGlycine maxBU546915--1e+0At1g71290F-box family protein-relatedO.I.C.G.S.X.
0.033e+034Contig11155_atHordeum vulgareContig11155--8e-1At4g15140unknown proteinO.I.C.G.S.X.
0.109e-1687Os02g0167500Oryza sativaAK069161.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein7e-16At3g54230nucleic acid binding / nucleotide binding / zinc ion bindingO.I.C.G.S.X.
0.128e-28127PtpAffx.218370.1.S1_atPopulus trichocarpapmrna33954hypothetical protein-1e-28At3g54230nucleic acid binding / nucleotide binding / zinc ion bindingO.I.C.G.S.X.
0.026e+034TaAffx.50236.1.S1_atTriticum aestivumCA744089--1e+0At4g21020late embryogenesis abundant domain-containing protein / LEA domain-containing proteinO.I.C.G.S.X.
0.058e-9611615758_atVitis viniferaCB341393--4e-9At3g54230nucleic acid binding / nucleotide binding / zinc ion bindingO.I.C.G.S.X.
0.043e-1583Zm.3581.1.A1_atZea maysAW066626--5e-15At3g54230nucleic acid binding / nucleotide binding / zinc ion bindingO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage