CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.02	5e-5	50	At5g66540	836786	-	F:molecular_function unknown;P:rRNA processing;C:cytosol, nucleolus, nucleus;MOFBPVA	O.I.	C.G.	S.X.
0.02	5e-5	50	At3g53310	824499	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MBOFPV	O.I.	C.G.	S.X.
0.02	5e-5	50	At1g76600	843993	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:nucleolus, nucleus;P	O.I.	C.G.	S.X.
0.02	2e-4	48	At1g29540	839831	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	S.X.
0.02	8e-4	46	At5g18520	831970	-	F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFB	O.I.	C.G.	S.X.
0.02	8e-4	46	At4g19100	2745715	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast, membrane;MOBFPV	O.I.	C.G.	S.X.
0.01	8e-4	46	At2g23100	816842	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:chloroplast;PMOFBVA	O.I.	C.G.	S.X.
0.03	8e-4	46	At1g66620	842980	seven in absentia (SINA) protein, putative	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus;MOFPBVA	O.I.	C.G.	S.X.
0.01	3e-3	44	At5g05510	830434	protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.13	7e-5	50	Gma.5847.3.S1_at	Glycine max	BU765083	-	-	3e-5	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.05	6e-6	52	Contig5201_at	Hordeum vulgare	Contig5201	-	-	2e-5	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.05	4e-10	67	Os03g0158200	Oryza sativa	CR290189	-	DEAD/DEAH box helicase, N-terminal domaincontaining protein	2e-10	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.17	9e-26	119	Ptp.825.2.S1_at	Populus trichocarpa	BU862707	-	-	4e-26	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.07	3e-6	54	TaAffx.58695.1.S1_at	Triticum aestivum	CA617182	-	-	8e-7	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.11	7e-14	77	1614351_at	Vitis vinifera	BQ795124	-	-	1e-13	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.
0.05	1e-6	54	Zm.6128.1.A1_at	Zea mays	CK370955	Hypothetical protein LOC100193503	-	5e-6	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	S.X.

Gene ID	At3g53110
Gene name	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)
Functional description	Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.