CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.73	7e-81	301	At2g35930	818166	PUB23 (PLANT U-BOX 23)	Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	S.X.
0.02	1e-2	42	At3g11840	820357	PUB24 (PLANT U-BOX 24)	Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	S.X.
0.02	1e-2	42	At1g29340	839808	PUB17 (PLANT U-BOX 17)	Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.	O.I.	C.G.	S.X.
0.01	4e-2	40	At2g24690	817005	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PFBO	O.I.	C.G.	S.X.
0.02	2e-1	38	At5g12870	831127	MYB46 (MYB DOMAIN PROTEIN 46)	Member of the R2R3 factor gene family.	O.I.	C.G.	S.X.
0.02	2e-1	38	At5g61770	836299	PPAN (PETER PAN-LIKE PROTEIN)	F:unknown;P:unknown;C:cellular_component unknown;MOFPVB	O.I.	C.G.	S.X.
0.01	6e-1	36	At5g64320	836553	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFMBA	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.05	4e-3	44	GmaAffx.61790.1.S1_at	Glycine max	AI966188	-	-	1e-3	At3g52450	PUB22 (PLANT U-BOX 22)	O.I.	C.G.	S.X.
0.03	3e-1	36	Contig25984_at	Hordeum vulgare	Contig25984	-	-	9e-1	At4g24380	unknown protein	O.I.	C.G.	S.X.
0.02	1e+0	36	Os04g0166600	Oryza sativa	AK102406.1	-	Conserved hypothetical protein	1e-8	At1g19330	unknown protein	O.I.	C.G.	S.X.
0.08	4e-12	73	PtpAffx.213398.1.S1_at	Populus trichocarpa	pmrna26212	hypothetical protein	-	3e-12	At3g52450	PUB22 (PLANT U-BOX 22)	O.I.	C.G.	S.X.
0.04	4e-2	40	TaAffx.51074.1.S1_at	Triticum aestivum	CA731412	-	-	9e-2	At2g28830	binding / structural constituent of ribosome / ubiquitin-protein ligase	O.I.	C.G.	S.X.
0.02	2e-1	36	1612747_at	Vitis vinifera	BQ800570	similar to ceramide glucosyltransferase	-	1e+0	At2g19880	ceramide glucosyltransferase, putative	O.I.	C.G.	S.X.
0.02	1e+0	34	Zm.12053.1.A1_at	Zea mays	CF623242	hypothetical protein LOC100191648	-	2e-2	At3g57910	D111/G-patch domain-containing protein	O.I.	C.G.	S.X.

Gene ID	At3g52450
Gene name	PUB22 (PLANT U-BOX 22)
Functional description	Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.