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| Gene ID | At3g51880 |
| Gene name | HMGB1 (HIGH MOBILITY GROUP B 1) |
| Functional description | Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.03 | 4e-3 | 42 | At5g04980 | 830380 | endonuclease/exonuclease/phosphatase family protein | F:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFPO | O.I. | C.G. | S.X. | |
| 0.03 | 4e-3 | 42 | At3g31430 | 822909 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P | O.I. | C.G. | S.X. | |
| 0.02 | 4e-3 | 42 | At2g21420 | 816681 | zinc finger protein-related | F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOMFPVA | O.I. | C.G. | S.X. | |
| 0.04 | 4e-3 | 42 | At1g62370 | 842535 | zinc finger (C3HC4-type RING finger) family protein | F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV | O.I. | C.G. | S.X. | |
| 0.02 | 2e-2 | 40 | At2g47860 | 819398 | phototropic-responsive NPH3 family protein | F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.17 | 2e-15 | 83 | GmaAffx.92861.1.S1_at | Glycine max | CF808586 | - | - | 8e-2 | At1g20693 | HMGB2 (HIGH MOBILITY GROUP B 2) | O.I. | C.G. | S.X. | |
| 0.04 | 1e-1 | 36 | Contig4670_s_at | Hordeum vulgare | Contig4670 | - | - | 4e+0 | At4g32530 | vacuolar ATP synthase, putative / V-ATPase, putative | O.I. | C.G. | S.X. | |
| 0.05 | 2e-3 | 44 | Os12g0212700 | Oryza sativa | 9640.m01037 | - | - | 5e-2 | At3g17160 | unknown protein | O.I. | C.G. | S.X. | |
| 0.17 | 2e-8 | 59 | PtpAffx.13687.1.S1_at | Populus trichocarpa | DN492122 | high mobility group family | - | 4e-8 | At3g51880 | HMGB1 (HIGH MOBILITY GROUP B 1) | O.I. | C.G. | S.X. | |
| 0.05 | 1e-3 | 44 | TaAffx.26627.1.S1_at | Triticum aestivum | CA687028 | - | - | 9e-4 | At3g51880 | HMGB1 (HIGH MOBILITY GROUP B 1) | O.I. | C.G. | S.X. | |
| 0.26 | 2e-20 | 97 | 1614276_s_at | Vitis vinifera | CB914684 | hypothetical protein LOC100246802 | - | 2e-19 | At3g51880 | HMGB1 (HIGH MOBILITY GROUP B 1) | O.I. | C.G. | S.X. | |
| 0.04 | 4e-1 | 34 | Zm.6402.3.S1_a_at | Zea mays | AI770444 | DELLA protein DWARF8 /// dwarf plant9 | - | 8e-1 | At5g42635 | glycine-rich protein | O.I. | C.G. | S.X. |
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