Homology analysis

Gene ID At3g51840
Functional description Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.021e-242Atmg00830--cytochrome c biogenesis orf382O.I.C.G.S.X.
0.013e+034At5g03340831870cell division cycle protein 48, putative / CDC48, putativeF:in 6 functions;P:unknown;C:cell wall;BOMFPAVO.I.C.G.S.X.
0.013e+034At5g46250834667RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPFOO.I.C.G.S.X.
0.013e+034At5g58350835947WNK4 (WITH NO K (=LYSINE) 4)Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.O.I.C.G.S.X.
0.013e+034At4g12730826885FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cdsO.I.C.G.S.X.
0.013e+034At2g33860817956ETT (ETTIN)ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.O.I.C.G.S.X.
0.013e+034At2g15620816055NIR1 (NITRITE REDUCTASE 1)involved in the second step of nitrate assimilationO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.315e-58226GmaAffx.92609.1.S1_atGlycine maxCF808334acyl-CoA oxidase-2e-58At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.159e-1167Contig3599_atHordeum vulgareContig3599--5e-10At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.304e-1377Os05g0163700Oryza sativaAK071561.1-Acyl-CoA dehydrogenase, N-terminal domaincontaining protein2e-13At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.351e-33145PtpAffx.163635.1.S1_atPopulus trichocarpaCV243119hypothetical protein-6e-54At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.172e-1377Ta.9335.1.S1_s_atTriticum aestivumCK194249--3e-13At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.344e-672541616720_atVitis viniferaBQ800605hypothetical protein LOC100257352-1e-66At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.
0.168e-857Zm.8995.1.A1_atZea maysAY107473.1glutaryl-CoA dehydrogenase-2e-7At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.C.G.S.X.

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