Homology analysis

Gene ID At3g51590
Gene name LTP12 (LIPID TRANSFER PROTEIN 12)
Functional description Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.043e+032At3g22930821865calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBVO.I.C.G.S.X.
0.041e+130At4g15715827249-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.021e+130At4g30950829220FAD6 (FATTY ACID DESATURASE 6)Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.O.I.C.G.S.X.
0.021e+130At3g25900822186HMT-1F:homocysteine S-methyltransferase activity;P:methionine biosynthetic process;C:cellular_component unknown;BOMPFAO.I.C.G.S.X.
0.011e+130At3g19370821471-F:unknown;P:unknown;C:plasma membrane;MOBFPAVO.I.C.G.S.X.
0.021e+130At3g01890820093SWIB complex BAF60b domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MFPBOO.I.C.G.S.X.
0.011e+130At3g59570825126RabGAP/TBC domain-containing proteinF:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MFOPO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.034e+032PsAffx.C52000068_atGlycine maxPsAffx.C52000068--5e+0At3g51590LTP12 (LIPID TRANSFER PROTEIN 12)O.I.C.G.S.X.
0.042e-238Contig19716_atHordeum vulgareContig19716--2e-6At3g01890SWIB complex BAF60b domain-containing proteinO.I.C.G.S.X.
0.055e+032Os.16308.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.034e+032PtpAffx.220488.1.S1_atPopulus trichocarpapmrna36881--4e+0At3g51590LTP12 (LIPID TRANSFER PROTEIN 12)O.I.C.G.S.X.
0.063e+032Ta.9742.2.A1_atTriticum aestivumCD453928--5e+0At3g51590LTP12 (LIPID TRANSFER PROTEIN 12)O.I.C.G.S.X.
0.045e-2361618030_atVitis viniferaCA809596--5e-6At5g0296040S ribosomal protein S23 (RPS23B)O.I.C.G.S.X.
0.042e+128ZmAffx.71.1.A1_atZea maysAI665169hypothetical protein LOC100274794-3e+0At1g50640ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)O.I.C.G.S.X.



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