Homology analysis

Gene ID At3g49170
Gene name EMB2261 (embryo defective 2261)
Functional description F:unknown;P:embryonic development ending in seed dormancy;C:chloroplast;POMFB

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.039e-859At4g14850827142LOI1 (lovastatin insensitive 1)Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase.O.I.C.G.S.X.
0.031e-656At4g02750828187pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:mitochondrion;POMFBO.I.C.G.S.X.
0.052e-552At5g52630835340MEF1 (MITOCHONDRIAL RNA EDITING FACTOR 1)Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes.O.I.C.G.S.X.
0.012e-552At4g13650826999pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAO.I.C.G.S.X.
0.022e-552At1g28690839769pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAO.I.C.G.S.X.
0.019e-550At4g33170829454pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:chloroplast;POMFBO.I.C.G.S.X.
0.019e-550At3g22690821840pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:regulation of chlorophyll biosynthetic process, photosystem II assembly, photosystem I assembly, thylakoid membrane organization, RNA modification;C:chloroplast;POMFBAO.I.C.G.S.X.
0.019e-550At2g02980814827pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POFMBAO.I.C.G.S.X.
0.023e-448At1g04840839402pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.052e-965Gma.7862.1.A1_atGlycine maxBU550720--4e-10At3g49170EMB2261 (embryo defective 2261)O.I.C.G.S.X.
0.016e-136Contig24943_atHordeum vulgareContig24943--3e-1At5g05990mitochondrial glycoprotein family protein / MAM33 family proteinO.I.C.G.S.X.
0.032e-450OsAffx.23612.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.214e-1791PtpAffx.212618.1.S1_atPopulus trichocarpapmrna24702hypothetical protein-2e-17At3g49170EMB2261 (embryo defective 2261)O.I.C.G.S.X.
0.046e-654Ta.8735.1.A1_atTriticum aestivumBQ162296--1e-6At3g49170EMB2261 (embryo defective 2261)O.I.C.G.S.X.
0.023e-5501620095_atVitis viniferaCF403669hypothetical protein LOC100260539-2e-5At2g15690pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.022e+034Zm.4090.1.A1_atZea maysAI834563--4e-1At2g41080pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.



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