Homology analysis

Gene ID At3g24870
Gene name DNA binding
Functional description F:DNA binding;P:unknown;C:apoplast;MOFPBVA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.9606326At3g24880822086DNA bindingF:DNA binding;P:unknown;C:unknown;MOFPBVAO.I.C.G.S.X.
0.012e-140At5g65630836689GTE7 (Global transcription factor group E 7)This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.O.I.C.G.S.X.
0.012e-140At5g56210835720WIP2 (WPP-domain Interacting Protein 2)F:protein heterodimerization activity, protein homodimerization activity;P:biological_process unknown;C:nuclear envelope, cell plate;MOFBPAVO.I.C.G.S.X.
0.012e-140At3g49670824129BAM2 (BARELY ANY MERISTEM 2)Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.O.I.C.G.S.X.
0.017e-138At5g24060832471unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVO.I.C.G.S.X.
0.017e-138At4g32551829390LUG (LEUNIG)LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.O.I.C.G.S.X.
0.017e-138At3g23930821976unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOFBPVAO.I.C.G.S.X.
0.007e-138At3g06530819831bindingF:binding;P:unknown;C:chloroplast, vacuole;MFOPBO.I.C.G.S.X.
0.007e-138At3g08850820032RAPTOR1Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.011e+038PsAffx.C62000041_atGlycine maxPsAffx.C62000041--4e-1At1g49620ICK5O.I.C.G.S.X.
0.019e-240Contig4409_atHordeum vulgareContig4409--1e-5At2g33470GLTP1 (glycolipid transfer protein 1)O.I.C.G.S.X.
0.041e-761Os08g0177300Oryza sativaAK063414.1-HSA domain containing protein6e-10At3g24880DNA bindingO.I.C.G.S.X.
0.052e-1483PtpAffx.212005.1.S1_atPopulus trichocarpapmrna23576hypothetical protein-3e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)O.I.C.G.S.X.
0.012e-140Ta.24325.1.S1_atTriticum aestivumCA485787--3e-3At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.C.G.S.X.
0.015e-2401613943_atVitis viniferaCF215633hypothetical protein LOC100263616-2e-9At1g23440pyrrolidone-carboxylate peptidase family proteinO.I.C.G.S.X.
0.011e+036Zm.11997.1.A1_atZea maysBM382529--4e+0At5g67010AP2 domain-containing transcription factor, putativeO.I.C.G.S.X.

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