Homology analysis

Gene ID At3g24650
Gene name ABI3 (ABA INSENSITIVE 3)
Functional description Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.037e-550At1g28300839724LEC2 (LEAFY COTYLEDON 2)Transcription factor that contains a B3 domain, a DNA-binding motif unique to plants and characteristic of several transcription factors. Plays critical roles both early and late during embryo development. LEC2 RNA accumulates primarily during seed development. LEC2 is required for the maintenance of suspensor morphology, specification of cotyledon identity, progression through the maturation phase, and suppression of premature germination. It establishes a cellular environment sufficient to initiate embryo development - ectopic, postembryonic expression of LEC2 in transgenic plants induces the formation of somatic embryos and other organ-like structures and often confers embryonic characteristics to seedlings and to reproductive and vegetative organs of mature plants.O.I.C.G.S.X.
0.012e-242At5g46760834719basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POMFBVO.I.C.G.S.X.
0.012e-242At4g32010829332HSL1 (HSI2-LIKE 1)F:transcription factor activity;P:seed maturation, positive regulation of seed germination, regulation of transcription;C:unknown;PMOO.I.C.G.S.X.
0.037e-240At3g26790822293FUS3 (FUSCA 3)Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.O.I.C.G.S.X.
0.017e-240At3g07060819892emb1974 (embryo defective 1974)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;MBOPAO.I.C.G.S.X.
0.017e-240At1g33040840199NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAO.I.C.G.S.X.
0.013e-138At5g14770831329pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAO.I.C.G.S.X.
0.013e-138At5g40780834078LHT1Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.043e-861GmaAffx.73695.1.S1_atGlycine maxAW471773--6e-9At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.
0.069e-961Contig10484_atHordeum vulgareContig10484--6e-10At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.
0.051e-759Os01g0911700Oryza sativaAK073805.1-Transcription activator VP1-rice9e-8At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.
0.202e-58228PtpAffx.144743.1.S1_atPopulus trichocarpaAJ003166.1hypothetical protein-1e-68At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.
0.045e-654Ta.42.1.S1_atTriticum aestivumAB047554.1--5e-6At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.
0.012e-2401617341_s_atVitis viniferaCF212973hypothetical protein LOC100262769-1e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.C.G.S.X.
0.069e-1891Zm.24.1.S1_atZea maysM60214.1viviparous1-3e-17At3g24650ABI3 (ABA INSENSITIVE 3)O.I.C.G.S.X.



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