Homology analysis

Gene ID At3g20780
Gene name ATTOP6B (topoisomerase 6 subunit B)
Functional description Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.013e-138At5g41140834116unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.S.X.
0.013e-138At5g20690832192ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.S.X.
0.013e-138At3g47500823904CDF3 (CYCLING DOF FACTOR 3)Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.O.I.C.G.S.X.
0.011e+036At5g44240834447haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:integral to membrane, membrane;MBOFPAVO.I.C.G.S.X.
0.021e+036At4g157333770387SCRL11 (SCR-Like 11)Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).O.I.C.G.S.X.
0.011e+036At3g52850824451VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles.O.I.C.G.S.X.
0.011e+036At3g05030819665NHX2 (SODIUM HYDROGEN EXCHANGER 2)member of Sodium proton exchanger familyO.I.C.G.S.X.
0.011e+036At1g69060843238heat shock protein bindingF:heat shock protein binding;P:biological_process unknown;C:plasma membrane;OMFBPAVO.I.C.G.S.X.
0.014e+034At5g092908307883'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeF:3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity;P:sulfur metabolic process;C:unknown;BOMFPAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.235e-31137Gma.7007.1.A1_atGlycine maxCD393631--2e-31At3g20780ATTOP6B (topoisomerase 6 subunit B)O.I.C.G.S.X.
0.151e-1067Contig12117_atHordeum vulgareContig12117--2e-10At3g20780ATTOP6B (topoisomerase 6 subunit B)O.I.C.G.S.X.
0.241e-1793Os09g0279600Oryza sativaAY371050.1-Topoisomerase 6 subunit B6e-18At3g20780ATTOP6B (topoisomerase 6 subunit B)O.I.C.G.S.X.
0.029e-240PtpAffx.215235.1.S1_atPopulus trichocarpapmrna29306hypothetical protein-2e-1At2g20616unknown proteinO.I.C.G.S.X.
0.151e-965Ta.14304.1.S1_atTriticum aestivumBU099535--1e-9At3g20780ATTOP6B (topoisomerase 6 subunit B)O.I.C.G.S.X.
0.091e-15831614915_atVitis viniferaBQ798171hypothetical protein LOC100265632-2e-15At3g20780ATTOP6B (topoisomerase 6 subunit B)O.I.C.G.S.X.
0.017e+032Zm.5741.2.A1_atZea maysBM074874Hypothetical protein LOC100191775-4e+0At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.C.G.S.X.



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