Homology analysis

Gene ID At3g20440
Gene name alpha-amylase/ catalytic/ cation binding
Functional description F:cation binding, catalytic activity, alpha-amylase activity;P:embryonic development ending in seed dormancy, carbohydrate metabolic process;C:chloroplast;BPOMFA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.013e-757At2g36390818212SBE2.1 (starch branching enzyme 2.1)Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.O.I.C.G.S.X.
0.013e-138At3g45290823667MLO3 (MILDEW RESISTANCE LOCUS O 3)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).O.I.C.G.S.X.
0.011e+036At5g51360835210-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.011e+036At4g03070828100AOP1Encodes a possible 2-oxoglutarate-dependent dioxygenase that is involved in glucosinolate biosynthesis. The gene is expressed in all ecotypes examined but the enzymatic activity has not been determined experimentally. In Col, there is one copy of this gene (aka AOP1.1) but Ler contains two copies, AOP1.1 and a tightly linked AOP1.2.O.I.C.G.S.X.
0.011e+036At2g16920816195UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:regulation of protein metabolic process, post-translational protein modification;C:cellular_component unknown;MOFBPVAO.I.C.G.S.X.
0.011e+036At2g46250819233myosin heavy chain-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.S.X.
0.011e+036At1g58210842188EMB1674 (EMBRYO DEFECTIVE 1674)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;MOFBPAVO.I.C.G.S.X.
0.015e+034At5g64840836607ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5)member of GCN subfamilyO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.025e-138Gma.2119.1.S1_atGlycine maxBU081878--3e-40At5g03650SBE2.2 (starch branching enzyme 2.2)O.I.C.G.S.X.
0.073e-963Contig16389_atHordeum vulgareContig16389--4e-9At3g20440alpha-amylase/ catalytic/ cation bindingO.I.C.G.S.X.
0.143e-656Os06g0367100Oryza sativaAK066930.1-Glycoside hydrolase, family 13, N-terminal domaincontaining protein2e-6At3g20440alpha-amylase/ catalytic/ cation bindingO.I.C.G.S.X.
0.204e-23111PtpAffx.201260.1.S1_atPopulus trichocarpapmrna2496hypothetical protein-2e-23At3g20440alpha-amylase/ catalytic/ cation bindingO.I.C.G.S.X.
0.013e-138TaAffx.118353.2.S1_atTriticum aestivumCA596309--4e+0At3g23255unknown proteinO.I.C.G.S.X.
0.014e-1361620339_atVitis viniferaCB834219--3e-1At3g51260PAD1 (20s proteasome alpha subunit pad1)O.I.C.G.S.X.
0.012e-448Zm.342.2.A1_atZea maysU65948.1hypothetical protein LOC100193930 /// starch branching enzyme3-2e-82At5g03650SBE2.2 (starch branching enzyme 2.2)O.I.C.G.S.X.



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