Homology analysis

Gene ID At3g19070
Gene name cell wall protein-related
Functional description F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.022e-344At5g03150831919JKD (JACKDAW)JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.O.I.C.G.S.X.
0.028e-342At5g19260832046unknown proteinF:unknown;P:unknown;C:unknown;MOFPBVO.I.C.G.S.X.
0.028e-342At1g08340837354rac GTPase activating protein, putativeF:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPVBAO.I.C.G.S.X.
0.033e-240At3g58850825054PAR2 (PHY RAPIDLY REGULATED 2)Encodes PHYTOCHROME RAPIDLY REGULATED2 (PAR2), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR1 (At2g42870). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510).O.I.C.G.S.X.
0.023e-240At3g20950821645CYP705A32member of CYP705AO.I.C.G.S.X.
0.043e-240At3g22070821769proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBPFVAO.I.C.G.S.X.
0.023e-240At1g47340841137F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOO.I.C.G.S.X.
0.023e-240At1g06920837202OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4)F:unknown;P:biological_process unknown;C:unknown;PMOBFO.I.C.G.S.X.
0.013e-240At1g53900841828GTP binding / translation initiation factorF:GTP binding, translation initiation factor activity;P:translational initiation, cellular metabolic process;C:eukaryotic translation initiation factor 2B complex;OBMFPAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.045e-550GmaAffx.50018.1.S1_s_atGlycine maxBG550677--6e-2At5g09310unknown proteinO.I.C.G.S.X.
0.021e+034Contig7046_atHordeum vulgareContig7046--2e+0At2g21600ATRER1BO.I.C.G.S.X.
0.024e-344Os12g0541400Oryza sativaBQ907958-Hypothetical protein3e+0At5g01300phosphatidylethanolamine-binding family proteinO.I.C.G.S.X.
0.032e-138PtpAffx.224051.1.S1_x_atPopulus trichocarpapmrna42286hypothetical protein-6e-1At3g46900COPT2O.I.C.G.S.X.
0.043e-240TaAffx.84129.1.S1_s_atTriticum aestivumCA644155--2e-2At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)O.I.C.G.S.X.
0.054e-5481617182_atVitis viniferaCB921793--5e-3At1g62240unknown proteinO.I.C.G.S.X.
0.034e+032ZmAffx.228.1.S1_atZea maysAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage