Homology analysis

Gene ID At3g18480
Gene name AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)
Functional description This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.013e-138At3g22790821850kinase interacting family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVO.I.C.G.S.X.
0.013e-138At3g42660823286nucleotide bindingF:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFBOPAVO.I.C.G.S.X.
0.013e-138At2g36190818191AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAO.I.C.G.S.X.
0.011e+036At4g22200828311AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3)Encodes a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential.O.I.C.G.S.X.
0.011e+036At3g43120823371auxin-responsive protein-relatedF:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.S.X.
0.011e+036At3g24440822034VRN5 (VERNALIZATION 5)Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM.O.I.C.G.S.X.
0.011e+036At2g26780817219bindingF:binding;P:biological_process unknown;C:membrane;MFPOO.I.C.G.S.X.
0.011e+036At1g69860843322proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;BPMFOO.I.C.G.S.X.
0.011e+036At1g31430840033pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:unknown;POMFBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.293e-26121GmaAffx.85366.2.S1_atGlycine maxCA801831--8e-27At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.041e-757Contig17498_atHordeum vulgareContig17498--1e-7At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.042e-346Os03g0710900Oryza sativaCB661798-CASP protein-like6e-4At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.455e-68260PtpAffx.210456.1.S1_atPopulus trichocarpapmrna20532hypothetical protein-4e-68At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.172e-1171Ta.7735.1.S1_atTriticum aestivumCD896851--2e-11At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.206e-582241616071_atVitis viniferaCB978649hypothetical protein LOC100259260-5e-58At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.158e-652Zm.936.1.A1_atZea maysCF052340--1e-5At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.



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