Homology analysis

Gene ID At3g12700
Gene name aspartyl protease family protein
Functional description F:aspartic-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;PMFO

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.014e-240At4g26610828768D6PKL1 (D6 PROTEIN KINASE LIKE 1)F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVAO.I.C.G.S.X.
0.017e-136At4g08960826474phosphotyrosyl phosphatase activator (PTPA) family proteinF:phosphatase activator activity;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.S.X.
0.017e-136At4g09140826493MLH1 (MUTL-HOMOLOGUE 1)Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.O.I.C.G.S.X.
0.017e-136At3g21480821702-F:molecular_function unknown;P:biological_process unknown;C:intracellular;MOPBFAO.I.C.G.S.X.
0.017e-136At3g62980825473TIR1 (TRANSPORT INHIBITOR RESPONSE 1)Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.O.I.C.G.S.X.
0.017e-136At2g29110817459ATGLR2.8member of Putative ligand-gated ion channel subunit familyO.I.C.G.S.X.
0.013e+034At4g30270829150MERI5B (meristem-5)encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.O.I.C.G.S.X.
0.013e+034At1g19150838498LHCA6PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,O.I.C.G.S.X.
0.013e+034At1g27090839598glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.024e+034GmaAffx.91977.1.S1_s_atGlycine maxCF807702--3e-63At4g02580NADH-ubiquinone oxidoreductase 24 kDa subunit, putativeO.I.C.G.S.X.
0.029e-238Contig19274_atHordeum vulgareContig19274--4e+0At5g09230SRT2 (SIRTUIN 2)O.I.C.G.S.X.
0.025e+034OsAffx.31493.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.026e-240PtpAffx.217662.1.S1_atPopulus trichocarpapmrna33016hypothetical protein-3e-1At4g28150unknown proteinO.I.C.G.S.X.
0.027e-136TaAffx.119356.1.A1_atTriticum aestivumBJ276004--2e-1At5g42635glycine-rich proteinO.I.C.G.S.X.
0.031e-2401610816_atVitis viniferaCF210488hypothetical protein LOC100252698-3e-18At4g28000ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.C.G.S.X.
0.025e+032ZmAffx.1396.1.S1_atZea mays40794996-71--6e-1At5g01230FtsJ-like methyltransferase family proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage