CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At3g11440

Gene name MYB65 (MYB DOMAIN PROTEIN 65)

Functional description Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.32	4e-98	359	At5g06100	830497	MYB33 (MYB DOMAIN PROTEIN 33)	Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. When the target site is mutated , expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity.	O.I.	C.G.	S.X.
0.04	4e-9	63	At4g09460	826530	ATMYB6	Encodes myb6 DNA-binding protein.	O.I.	C.G.	S.X.
0.04	4e-9	63	At1g22640	838870	MYB3 (MYB DOMAIN PROTEIN 3)	MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression	O.I.	C.G.	S.X.
0.04	1e-8	61	At2g26950	817236	AtMYB104 (myb domain protein 104)	Member of the R2R3 factor gene family.	O.I.	C.G.	S.X.
0.04	6e-8	59	At1g48000	841218	MYB112 (myb domain protein 112)	Encodes a putative transcription factor (MYB112).	O.I.	C.G.	S.X.
0.03	1e-5	52	At4g38620	830018	MYB4	Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.	O.I.	C.G.	S.X.
0.02	1e-5	52	At2g47190	819332	MYB2 (MYB DOMAIN PROTEIN 2)	Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.03	5e-6	54	GmaAffx.5013.1.S1_at	Glycine max	BM092559	-	-	2e-13	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	C.G.	S.X.
0.07	7e-6	52	X87690_s_at	Hordeum vulgare	X87690	m12 protein	-	1e-15	At4g26930	MYB97 (myb domain protein 97)	O.I.	C.G.	S.X.
0.07	3e-5	52	Os01g0812000	Oryza sativa	AK119607.1	-	MYB8	5e-9	At4g26930	MYB97 (myb domain protein 97)	O.I.	C.G.	S.X.
0.24	2e-36	155	PtpAffx.200094.1.S1_at	Populus trichocarpa	pmrna172	hypothetical protein	-	2e-43	At5g06100	MYB33 (MYB DOMAIN PROTEIN 33)	O.I.	C.G.	S.X.
0.06	9e-4	46	Ta.24098.1.S1_at	Triticum aestivum	AJ615787	-	-	1e-9	At4g26930	MYB97 (myb domain protein 97)	O.I.	C.G.	S.X.
0.03	2e-2	40	1619579_at	Vitis vinifera	AB073014.1	-	-	4e-13	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	C.G.	S.X.
0.02	1e+0	34	Zm.10116.1.S1_at	Zea mays	AY108928.1	-	-	5e+0	At3g06790	plastid developmental protein DAG, putative	O.I.	C.G.	S.X.

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