Homology analysis

Gene ID At3g11380
Gene name pentatricopeptide (PPR) repeat-containing protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMBF

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.342e-35151At3g11350820308-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.S.X.
0.129e-1375At1g28020839695pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMO.I.C.G.S.X.
0.025e-240At4g36390829791radical SAM domain-containing protein / TRAM domain-containing proteinF:iron-sulfur cluster binding, catalytic activity;P:biological_process unknown;C:chloroplast;OBMAPO.I.C.G.S.X.
0.015e-240At2g47230819336agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.S.X.
0.012e-138At5g20730832196NPH4 (NON-PHOTOTROPHIC HYPOCOTYL)Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.O.I.C.G.S.X.
0.012e-138At4g30810829204scpl29 (serine carboxypeptidase-like 29)F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOBO.I.C.G.S.X.
0.022e-138At4g03170828050DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OPMFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.023e-138PsAffx.C183000018_s_atGlycine maxPsAffx.C183000018--2e-2At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.C.G.S.X.
0.014e-136Contig13781_atHordeum vulgareContig13781--6e-6At1g22330RNA binding / nucleic acid binding / nucleotide bindingO.I.C.G.S.X.
0.014e-138OsAffx.17935.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.022e-242PtpAffx.206911.1.S1_x_atPopulus trichocarpapmrna13722hypothetical protein-3e-3At2g33850unknown proteinO.I.C.G.S.X.
0.028e-136TaAffx.104796.1.S1_x_atTriticum aestivumCA744716--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.C.G.S.X.
0.024e-3421613372_atVitis viniferaCF514636similar to P-glycoprotein-2e-5At1g06070bZIP transcription factor, putative (bZIP69)O.I.C.G.S.X.
0.023e-136ZmAffx.788.1.A1_atZea maysAI759113--8e-1At4g33925unknown proteinO.I.C.G.S.X.



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