Homology analysis

Gene ID At3g10390
Gene name FLD (FLOWERING LOCUS D)
Functional description Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.055e-654At1g62830842582LDL1 (LSD1-LIKE1)Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.O.I.C.G.S.X.
0.018e-240At3g24460822036TMS membrane family protein / tumour differentially expressed (TDE) family proteinF:unknown;P:unknown;C:membrane;MFPOO.I.C.G.S.X.
0.018e-240At3g09960820157calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:cellular_component unknown;BOPMFAVO.I.C.G.S.X.
0.028e-240At3g13682820577LDL2 (LSD1-LIKE2)Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.O.I.C.G.S.X.
0.013e-138At3g46510823804PUB13 (PLANT U-BOX 13)Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.O.I.C.G.S.X.
0.013e-138At2g18480816363mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVO.I.C.G.S.X.
0.013e-138At1g21870838789glucose-6-phosphate/phosphate translocator-relatedF:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBO.I.C.G.S.X.
0.011e+036At5g06820830573SRF2 (STRUBBELIG-RECEPTOR FAMILY 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.S.X.
0.011e+036At5g40320834030DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;POMO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.042e-656GmaAffx.84683.1.S1_atGlycine maxBM086029--4e-21At3g13682LDL2 (LSD1-LIKE2)O.I.C.G.S.X.
0.113e-1273Contig22118_atHordeum vulgareContig22118--1e-12At3g10390FLD (FLOWERING LOCUS D)O.I.C.G.S.X.
0.144e-861Os.53652.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.448e-58226PtpAffx.207617.1.S1_atPopulus trichocarpapmrna15104hypothetical protein-5e-58At3g10390FLD (FLOWERING LOCUS D)O.I.C.G.S.X.
0.013e-138TaAffx.5436.1.S1_atTriticum aestivumCA710775--2e-1At5g48820ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)O.I.C.G.S.X.
0.036e-6521608320_atVitis viniferaCF519042hypothetical protein LOC100245322-3e-7At1g62830LDL1 (LSD1-LIKE1)O.I.C.G.S.X.
0.021e-138ZmAffx.285.1.A1_atZea maysAI670418--1e+1At5g57270unknown proteinO.I.C.G.S.X.



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