Homology analysis

Gene ID At3g07060
Gene name emb1974 (embryo defective 1974)
Functional description F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;MBOPA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.025e-344At5g44280834451RING1A (RING 1A)Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.O.I.C.G.S.X.
0.012e-242At5g06910830582ATJ6 (Arabidopsis J-domain protein 6)DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.O.I.C.G.S.X.
0.012e-242At4g20340827782RNA polymerase II transcription factor/ transcription initiation factorF:RNA polymerase II transcription factor activity, transcription initiation factor activity;P:transcription initiation from RNA polymerase II promoter;C:endomembrane system, transcription factor TFIIE complex;MOFPVBAO.I.C.G.S.X.
0.012e-242At2g33810817948SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.O.I.C.G.S.X.
0.017e-240At4g16610827362zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMFOBO.I.C.G.S.X.
0.027e-240At4g21660828253proline-rich spliceosome-associated (PSP) family proteinF:unknown;P:mRNA processing;C:nucleus, chloroplast;MOFPVBAO.I.C.G.S.X.
0.017e-240At4g34100829556protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:chloroplast;MPOFVO.I.C.G.S.X.
0.017e-240At4g08570826418heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.037e-344Gma.7780.1.A1_atGlycine maxBU550204--3e-1At1g76650calcium-binding EF hand family proteinO.I.C.G.S.X.
0.021e-138Contig3345_atHordeum vulgareContig3345--4e-7At5g46020unknown proteinO.I.C.G.S.X.
0.014e-242OsAffx.5065.1.S1_x_atOryza sativa---0O.I.C.G.S.X.
0.077e-344PtpAffx.202656.1.S1_atPopulus trichocarpapmrna5305hypothetical protein-3e-3At3g07060emb1974 (embryo defective 1974)O.I.C.G.S.X.
0.013e-138TaAffx.71044.1.S1_x_atTriticum aestivumAJ609951--4e+0At3g13227serine-rich protein-relatedO.I.C.G.S.X.
0.012e-2401611437_atVitis viniferaCD800413hypothetical protein LOC100262739-1e+0At1g59600ZCW7O.I.C.G.S.X.
0.012e+034Zm.9376.1.A1_atZea maysBM332576--1e+0At5g06330hairpin-responsive protein, putative (HIN1)O.I.C.G.S.X.



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