Homology analysis

Gene ID At3g05500
Gene name rubber elongation factor (REF) family protein
Functional description F:unknown;P:biological_process unknown;C:vacuole;P

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.024e-136At5g47500834800pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.S.X.
0.014e-136At1g71710843501inositol polyphosphate 5-phosphatase, putativeF:inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFPOVO.I.C.G.S.X.
0.014e-136At1g48410841262AGO1 (ARGONAUTE 1)Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.O.I.C.G.S.X.
0.024e-136At1g31500840040endonuclease/exonuclease/phosphatase family proteinF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.073e-550Gma.726.1.S1_s_atGlycine maxBG839313--4e-5At3g05500rubber elongation factor (REF) family proteinO.I.C.G.S.X.
0.037e-134Contig13667_atHordeum vulgareContig13667--6e-6At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)O.I.C.G.S.X.
0.033e+034Os12g0420866Oryza sativa9640.m02207--6e-2At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)O.I.C.G.S.X.
0.088e-342Ptp.5745.1.S1_atPopulus trichocarpaCV253571hypothetical protein-1e-2At3g05500rubber elongation factor (REF) family proteinO.I.C.G.S.X.
0.046e+032TaAffx.79730.1.S1_atTriticum aestivumCA705431Flavanone 3-dioxygenase-2e-15At3g51240F3H (FLAVANONE 3-HYDROXYLASE)O.I.C.G.S.X.
0.081e-1361617736_a_atVitis viniferaCF209766hypothetical protein LOC100240929-6e-1At3g05500rubber elongation factor (REF) family proteinO.I.C.G.S.X.
0.031e+130ZmAffx.915.1.S1_atZea maysAI770972--8e+0Atmg01050-O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage