Homology analysis

Gene ID At3g04370
Gene name PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)
Functional description Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.028e-342At2g46510819262ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.O.I.C.G.S.X.
0.011e-138At5g41360834138XPB2Encodes XPB2, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.O.I.C.G.S.X.
0.011e-138At1g13020837859eukaryotic translation initiation factor, putative (EIF4B5)F:translation initiation factor activity;P:biological_process unknown;C:cellular_component unknown;MBOPFVAO.I.C.G.S.X.
0.015e-136At5g41370834139XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1)Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.O.I.C.G.S.X.
0.015e-136At4g36150829772disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAVO.I.C.G.S.X.
0.025e-136At4g28300828945hydroxyproline-rich glycoprotein family proteinEncodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.O.I.C.G.S.X.
0.015e-136At3g59410825110protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:protein amino acid phosphorylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;MPOFBVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.033e-344Gma.12568.1.A1_atGlycine maxCD391529--8e-4At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)O.I.C.G.S.X.
0.036e-238Contig9370_atHordeum vulgareContig9370--2e-1At1g78410VQ motif-containing proteinO.I.C.G.S.X.
0.021e-242OsAffx.25534.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.033e+034PtpAffx.9674.1.A1_atPopulus trichocarpaCA925198hypothetical protein-7e-32At5g26742emb1138 (embryo defective 1138)O.I.C.G.S.X.
0.035e-136Ta.18193.1.S1_atTriticum aestivumCA631013--2e-1At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)O.I.C.G.S.X.
0.036e-1341610858_atVitis viniferaCF204483.1--3e-1At3g44570unknown proteinO.I.C.G.S.X.
0.032e-136Zm.13515.1.A1_atZea maysBI674748R2R3MYB-domain protein-8e-17At4g38620MYB4O.I.C.G.S.X.



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