Homology analysis

Gene ID At3g02040
Gene name SRG3 (senescence-related gene 3)
Functional description F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.021e-138At4g00040828224chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, biosynthetic process, metabolic process;C:unknown;PBOFO.I.C.G.S.X.
0.055e-136At5g41080834110glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAVO.I.C.G.S.X.
0.015e-136At3g56410824808unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVAO.I.C.G.S.X.
0.025e-136At1g68310843160vacuolar sorting signal bindingEncodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.O.I.C.G.S.X.
0.022e+034At5g20630832185GER3 (GERMIN 3)Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.O.I.C.G.S.X.
0.022e+034At5g11260830996HY5 (ELONGATED HYPOCOTYL 5)Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.082e-448Gma.6211.1.S1_atGlycine maxBU089706--1e-4At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.
0.037e-238Contig8049_atHordeum vulgareContig8049--2e-1At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.
0.054e-344Os08g0535700Oryza sativa9636.m04310-Glycerophosphoryl diester phosphodiesterase familyprotein2e-3At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.
0.155e-240Ptp.5037.1.S1_s_atPopulus trichocarpaBI126545hypothetical protein-3e-2At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.
0.046e-136Ta.6770.1.S1_s_atTriticum aestivumBQ168403--4e-1At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.
0.131e-14791621688_atVitis viniferaCF415096hypothetical protein LOC100261754-8e-10At5g41080glycerophosphoryl diester phosphodiesterase family proteinO.I.C.G.S.X.
0.104e-342Zm.13162.1.A1_atZea maysCO521967--9e-3At3g02040SRG3 (senescence-related gene 3)O.I.C.G.S.X.

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