Homology analysis

Gene ID At2g45190
Gene name AFO (ABNORMAL FLORAL ORGANS)
Functional description Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.215e-34145At4g00180827914YAB3 (YABBY3)YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades.O.I.C.G.S.X.
0.092e-963At2g26580817199YAB5 (YABBY5)F:transcription factor activity;P:regulation of transcription;C:unknown;POFO.I.C.G.S.X.
0.142e-550At1g69180843249CRC (CRABS CLAW)Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.O.I.C.G.S.X.
0.042e-240At5g52750835352heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMO.I.C.G.S.X.
0.032e-240At2g32710817831KRP4Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI). A member of seven KRP genes found in Arabidopsis thaliana. Negative regulator of cell division. Expressed in actively dividing cells.O.I.C.G.S.X.
0.142e-240At1g084653766682YAB2 (YABBY2)Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organsO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.299e-49194Gma.12239.1.A1_atGlycine maxCD416578--1e-48At2g45190AFO (ABNORMAL FLORAL ORGANS)O.I.C.G.S.X.
0.072e-446Contig11568_atHordeum vulgareContig11568--1e-10At2g26580YAB5 (YABBY5)O.I.C.G.S.X.
0.185e-1169Os07g0160100Oryza sativaAK100222.1-YABBY24e-15At1g08465YAB2 (YABBY2)O.I.C.G.S.X.
0.311e-35151Ptp.5981.1.S1_a_atPopulus trichocarpaCK100790hypothetical protein-9e-36At2g45190AFO (ABNORMAL FLORAL ORGANS)O.I.C.G.S.X.
0.162e-654Ta.7227.1.A1_atTriticum aestivumCK205871--2e-6At2g45190AFO (ABNORMAL FLORAL ORGANS)O.I.C.G.S.X.
0.315e-501961612362_atVitis viniferaCF372908hypothetical protein LOC100243667-4e-31At4g00180YAB3 (YABBY3)O.I.C.G.S.X.
0.127e-1373Zm.15822.1.S1_atZea maysAY313901.1yabby14 protein-4e-5At2g26580YAB5 (YABBY5)O.I.C.G.S.X.



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