CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At2g43880

Gene name polygalacturonase, putative / pectinase, putative

Functional description F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.03	2e-7	57	At1g78400	844176	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.03	2e-7	57	At1g23460	838954	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.03	1e-5	52	At1g70500	843386	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.03	4e-5	50	At1g60590	842353	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVA	O.I.	C.G.	S.X.
0.03	4e-5	50	At1g65570	842868	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.04	2e-4	48	At5g48140	834866	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.03	6e-4	46	At2g43870	818991	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.04	9e-3	42	At1g05660	837073	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	S.X.
0.04	9e-3	42	At1g05650	837072	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.04	8e-1	36	GmaAffx.79361.1.S1_at	Glycine max	CA785641	-	-	3e-1	At5g39910	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.02	5e+0	32	Contig11972_at	Hordeum vulgare	Contig11972	-	-	2e-1	At3g26610	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	S.X.
0.03	3e-4	48	Os01g0636500	Oryza sativa	CR278327	-	Glycoside hydrolase, family 28 protein	6e-4	At1g10640	polygalacturonase	O.I.	C.G.	S.X.
0.09	9e-7	56	PtpAffx.225335.1.S1_at	Populus trichocarpa	pmrna44617	hypothetical protein	-	6e-7	At2g43880	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	S.X.
0.02	1e+1	32	TaAffx.92203.1.A1_at	Triticum aestivum	BJ276385	-	-	4e+0	At5g43970	TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V)	O.I.	C.G.	S.X.
0.04	5e-5	48	1617208_at	Vitis vinifera	AF159125.1	polygalacturonase	-	8e-9	At5g14650	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	S.X.
0.02	3e-1	36	Zm.19112.1.A1_at	Zea mays	CO517957	-	-	3e-4	At2g40890	CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)	O.I.	C.G.	S.X.

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