Homology analysis

Gene ID At2g42830
Functional description AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.751e-142506At3g58780825047SHP1 (SHATTERPROOF 1)One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.O.I.C.G.S.X.
0.232e-24113At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.S.X.
0.237e-1271At4g09960826586STK (SEEDSTICK)a MADS box transcription factor expressed in the carpel and ovulesO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.196e-1375GmaAffx.79004.1.S1_atGlycine maxBU761215MADS-box protein-2e-17At4g18960AG (AGAMOUS)O.I.C.G.S.X.
0.165e-1167Contig11029_atHordeum vulgareContig11029--2e-10At2g42830SHP2 (SHATTERPROOF 2)O.I.C.G.S.X.
0.266e-23109OsAffx.23186.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.179e-1271PtpAffx.43839.1.S1_atPopulus trichocarpaDN501305hypothetical protein-3e-23At4g09960STK (SEEDSTICK)O.I.C.G.S.X.
0.172e-654Ta.12700.1.S1_atTriticum aestivumAB084577.1MADS box transcription factor-3e-6At2g42830SHP2 (SHATTERPROOF 2)O.I.C.G.S.X.
0.168e-15791619742_atVitis viniferaAF265562.1MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)O.I.C.G.S.X.
0.175e-1787Zm.14826.1.S1_atZea maysAJ430637.1m23 protein-2e-16At2g42830SHP2 (SHATTERPROOF 2)O.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage