Homology analysis

Gene ID At2g42350
Gene name zinc finger (C3HC4-type RING finger) family protein
Functional description F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.232e-1169At2g42360818837zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.S.X.
0.053e-446At2g27940817338zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.S.X.
0.053e-446At1g20823838674zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVO.I.C.G.S.X.
0.021e+034At4g14220827062RHF1A (RING-H2 GROUP F1A)encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond.O.I.C.G.S.X.
0.021e+034At4g14720827125PPD2PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth.O.I.C.G.S.X.
0.021e+034At3g54640824629TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).O.I.C.G.S.X.
0.061e+034At2g37580818334zinc finger (C3HC4-type RING finger) family proteinF:protein binding, transferase activity, transferring glycosyl groups, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.S.X.
0.011e+034At1g61040842395VIP5 (vernalization independence 5)Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.083e-240GmaAffx.25384.2.S1_atGlycine maxAI443646--1e-8At5g05810ATL43O.I.C.G.S.X.
0.032e-136EBro07_SQ002_B11_atHordeum vulgareEBro07_SQ002_B11--3e+0At3g56380ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17)O.I.C.G.S.X.
0.041e+132OsAffx.31221.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.042e+034PtpAffx.200250.1.S1_atPopulus trichocarpapmrna486hypothetical protein-7e-1At2g42350zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.035e+032TaAffx.56541.1.S1_atTriticum aestivumCA649442--2e-1At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.C.G.S.X.
0.034e-1341615645_atVitis viniferaCB969433hypothetical protein LOC100257930-1e+0At2g42350zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.039e+030ZmAffx.911.1.A1_atZea maysAI770952--8e-1At5g42635glycine-rich proteinO.I.C.G.S.X.

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