Homology analysis

Gene ID At2g41500
Gene name EMB2776
Functional description Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.553e-99363At2g05720815121transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPAO.I.C.G.S.X.
0.041e-242At5g50665835137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.041e-242At5g50565835125unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.S.X.
0.011e-242At4g08350826391GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2)F:transcription elongation regulator activity, structural constituent of ribosome, transcription factor activity;P:translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter;C:ribosome, intracellular;MOFPBVAO.I.C.G.S.X.
0.011e-242At3g18390821368EMB1865 (embryo defective 1865)F:RNA binding;P:embryonic development ending in seed dormancy;C:chloroplast;OPMFVBAO.I.C.G.S.X.
0.012e-138At5g37630833741EMB2656 (EMBRYO DEFECTIVE 2656)F:binding;P:embryonic development ending in seed dormancy, mitotic chromosome condensation;C:cellular_component unknown;MFOPBO.I.C.G.S.X.
0.012e-138At5g53000835379TAP46 (2A phosphatase associated protein of 46 kD)PP2A-associated protein with a possible function in the chilling responseO.I.C.G.S.X.
0.012e-138At4g010376240517ubiquitin thiolesteraseF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFBPVAO.I.C.G.S.X.
0.012e-138At3g62590825433lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFMBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.155e-1273GmaAffx.44460.1.S1_atGlycine maxBE440845--1e-12At2g41500EMB2776O.I.C.G.S.X.
0.097e-652Contig13245_atHordeum vulgareContig13245--1e-5At2g41500EMB2776O.I.C.G.S.X.
0.031e-140Os.18521.1.A1_atOryza sativa---0O.I.C.G.S.X.
0.083e-1067PtpAffx.213278.1.S1_atPopulus trichocarpapmrna25970--2e-10At2g41500EMB2776O.I.C.G.S.X.
0.086e-550Ta.27698.1.S1_atTriticum aestivumCA498262--6e-5At2g41500EMB2776O.I.C.G.S.X.
0.024e+0321622631_atVitis viniferaCA818766--3e+0At2g15325protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.S.X.
0.076e-652Zm.2082.1.A1_atZea maysCO521262hypothetical protein LOC100279862-2e-5At2g41500EMB2776O.I.C.G.S.X.



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