Homology analysis

Gene ID At2g41050
Gene name PQ-loop repeat family protein / transmembrane family protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FMOP

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.606e-87321At4g20100827756PQ-loop repeat family protein / transmembrane family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;FMPOO.I.C.G.S.X.
0.026e-136At1g09520837478protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:chloroplast;POFO.I.C.G.S.X.
0.012e+034At5g58850836002MYB119 (MYB DOMAIN PROTEIN 119)Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119).O.I.C.G.S.X.
0.012e+034At5g45840834624leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.S.X.
0.012e+034At5g07770830670formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:unknown;C:chloroplast;MPOFBVAO.I.C.G.S.X.
0.012e+034At5g07780830671formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MPOBFVAO.I.C.G.S.X.
0.012e+034At5g07650830658formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MOPFBAO.I.C.G.S.X.
0.022e+034At5g26270832696unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO.I.C.G.S.X.
0.012e+034At5g39550833951VIM3 (VARIANT IN METHYLATION 3)Encodes the VIM3/ORTH1 protein that is similar to VIM1. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. This protein functions as an E3 ubiquitin ligase in vitro with members of the UBC8 family E2s. Either of the two RING domains present in the protein can promote ubiquitylation in vitro, but, not the PHD domain. Over-expression of ORTH1/VIM3 leads to decreased levels of FWA methylation, increased levels of FWA transcripts, and delayed flowering. Cen180 repeats are also hypomethylated in plants overexpressing this protein.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.028e-136GmaAffx.61066.1.S1_atGlycine maxCA782606--3e-3At5g05365metal ion bindingO.I.C.G.S.X.
0.045e-652Contig9506_atHordeum vulgareContig9506--1e-5At2g41050PQ-loop repeat family protein / transmembrane family proteinO.I.C.G.S.X.
0.133e-1377Os01g0266800Oryza sativaAK069474.1-Cystinosin/ERS1p repeat containing protein3e-13At2g41050PQ-loop repeat family protein / transmembrane family proteinO.I.C.G.S.X.
0.307e-23109PtpAffx.213189.1.S1_atPopulus trichocarpapmrna25804hypothetical protein-4e-23At2g41050PQ-loop repeat family protein / transmembrane family proteinO.I.C.G.S.X.
0.022e+034TaAffx.4501.3.S1_atTriticum aestivumCA737866--8e-1At2g41050PQ-loop repeat family protein / transmembrane family proteinO.I.C.G.S.X.
0.037e-1341614494_atVitis viniferaCB970251hypothetical protein LOC100251961-6e-2At5g64160unknown proteinO.I.C.G.S.X.
0.021e+034Zm.13107.1.S1_atZea maysCD438929--6e+0At5g35375unknown proteinO.I.C.G.S.X.



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