Homology analysis

Gene ID At2g39550
Gene name PGGT-I
Functional description encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.019e-342At3g11080820279AtRLP35 (Receptor Like Protein 35)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAVO.I.C.G.S.X.
0.029e-342At1g72890843620disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.S.X.
0.024e-240At4g39870830146-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVO.I.C.G.S.X.
0.014e-240At4g17620827482glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMFPVAO.I.C.G.S.X.
0.014e-240At4g08350826391GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2)F:transcription elongation regulator activity, structural constituent of ribosome, transcription factor activity;P:translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter;C:ribosome, intracellular;MOFPBVAO.I.C.G.S.X.
0.024e-240At1g23980839010zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.S.X.
0.014e-240At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.141e-1585GmaAffx.86511.1.S1_atGlycine maxBG789938--3e-16At2g39550PGGT-IO.I.C.G.S.X.
0.042e-240Contig15465_atHordeum vulgareContig15465--2e-2At2g39550PGGT-IO.I.C.G.S.X.
0.118e-1169Os.12757.4.S1_x_atOryza sativa---0O.I.C.G.S.X.
0.111e-861PtpAffx.9411.1.A1_atPopulus trichocarpaBP934185hypothetical protein-5e-9At2g39550PGGT-IO.I.C.G.S.X.
0.032e+034TaAffx.79150.1.S1_x_atTriticum aestivumCA720712--3e+0At5g17650glycine/proline-rich proteinO.I.C.G.S.X.
0.085e-11671611196_atVitis viniferaCF212936hypothetical protein LOC100241042-7e-11At2g39550PGGT-IO.I.C.G.S.X.
0.024e+032Zm.8348.1.A1_atZea maysBM073795Hypothetical protein LOC100193915-3e-1At3g20750zinc finger (GATA type) family proteinO.I.C.G.S.X.



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