Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | At2g38560 |
| Gene name | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) |
| Functional description | Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.01 | 4e-2 | 40 | At4g09360 | 826518 | disease resistance protein (NBS-LRR class), putative | F:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFAV | O.I. | C.G. | S.X. | |
| 0.02 | 1e-1 | 38 | At5g56370 | 835738 | F-box family protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | C.G. | S.X. | |
| 0.02 | 6e-1 | 36 | At4g00160 | 828180 | F-box family protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | C.G. | S.X. | |
| 0.01 | 6e-1 | 36 | At1g27940 | 839687 | PGP13 (P-GLYCOPROTEIN 13) | F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV | O.I. | C.G. | S.X. | |
| 0.02 | 2e+0 | 34 | At5g48950 | 834953 | thioesterase family protein | F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOP | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | At4g29800 | 829102 | PLP8 (PATATIN-LIKE PROTEIN 8) | F:unknown;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOFM | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | At4g02630 | 828217 | protein kinase family protein | F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | At4g35800 | 829734 | NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) | Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.04 | 3e+0 | 34 | GmaAffx.82510.1.S1_at | Glycine max | BG239314 | - | - | 1e-1 | At5g37820 | NIP4 | O.I. | C.G. | S.X. | |
| 0.11 | 1e-6 | 54 | Contig7642_at | Hordeum vulgare | Contig7642 | - | - | 1e-6 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. | |
| 0.06 | 1e-9 | 65 | Os03g0815900 | Oryza sativa | AK119756.1 | - | - | 9e-10 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. | |
| 0.25 | 4e-21 | 103 | Ptp.3352.1.S1_s_at | Populus trichocarpa | CV260136 | hypothetical protein | - | 2e-21 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. | |
| 0.18 | 4e-14 | 79 | TaAffx.98089.1.A1_at | Triticum aestivum | BQ168726 | - | - | 2e-14 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. | |
| 0.07 | 5e-11 | 67 | 1607085_at | Vitis vinifera | CF515982 | hypothetical protein LOC100263760 | - | 2e-10 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. | |
| 0.10 | 1e-6 | 54 | Zm.5158.1.S1_at | Zea mays | AY106564.1 | hypothetical protein LOC100274429 | - | 3e-6 | At2g38560 | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage