CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At2g37640

Gene name EXP3

Functional description member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.52	2e-37	157	At5g02260	831736	ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	S.X.
0.42	4e-29	129	At2g28950	817444	ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	S.X.
0.22	5e-22	105	At2g03090	814838	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	S.X.
0.34	3e-20	99	At2g39700	818553	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	S.X.
0.28	2e-15	83	At3g55500	824715	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	S.X.
0.19	1e-10	67	At5g56320	835731	ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.25	2e-31	137	GmaAffx.93176.1.S1_s_at	Glycine max	CF808901	expansin	-	2e-24	At2g28950	ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)	O.I.	C.G.	S.X.
0.15	2e-10	65	Contig7055_at	Hordeum vulgare	Contig7055	-	-	1e-5	At1g69530	ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)	O.I.	C.G.	S.X.
0.16	2e-16	87	Os03g0822000	Oryza sativa	AF247164.1	-	Alpha-expansin OsEXPA7	2e-30	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	O.I.	C.G.	S.X.
0.30	6e-13	75	PtpAffx.24775.2.A1_x_at	Populus trichocarpa	CV272777	hypothetical protein	-	1e-41	At2g39700	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	O.I.	C.G.	S.X.
0.28	2e-24	113	Ta.5046.1.S1_at	Triticum aestivum	AY543535.1	expansin EXPA9	-	3e-24	At2g37640	EXP3	O.I.	C.G.	S.X.
0.31	2e-22	105	1608191_at	Vitis vinifera	CD798831	hypothetical protein LOC100245911	-	4e-20	At2g39700	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	O.I.	C.G.	S.X.
0.21	2e-19	95	Zm.13728.2.S1_at	Zea mays	AY106266.1	-	-	1e-14	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	O.I.	C.G.	S.X.

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