CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.08	3e-24	113	At5g56270	835726	WRKY2	WRKY transcription factor 2	O.I.	C.G.	S.X.
0.05	1e-17	91	At4g26440	828750	WRKY34 (WRKY DNA-BINDING PROTEIN 34)	member of WRKY Transcription Factor; Group I	O.I.	C.G.	S.X.
0.06	2e-10	67	At3g01080	821213	WRKY58	member of WRKY Transcription Factor; Group I	O.I.	C.G.	S.X.
0.04	4e-8	59	At2g03340	814863	WRKY3	Encodes WRKY DNA-binding protein 3 (WRKY3).	O.I.	C.G.	S.X.
0.09	4e-5	50	At2g38470	818429	WRKY33	Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.	O.I.	C.G.	S.X.
0.05	2e-4	48	At2g04880	815035	ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1)	Encodes WRKY1, a member of the WRKY transcription factors in plants involved in disease resistance, abiotic stress, senescence as well as in some developmental processes. WRKY1 is involved in the salicylic acid signaling pathway. The crystal structure of the WRKY1 C-terminal domain revealed a zinc-binding site and identified the DNA-binding residues of WRKY1.	O.I.	C.G.	S.X.
0.02	7e-4	46	At3g09880	820146	ATB' BETA	Encodes B' regulatory subunit of PP2A (AtB'beta).	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.09	1e-6	56	GmaAffx.6438.7.S1_at	Glycine max	BE800712	WRKY19 (WRKY19)	-	2e-7	At2g37260	TTG2 (TRANSPARENT TESTA GLABRA 2)	O.I.	C.G.	S.X.
0.04	5e-3	42	Contig12033_at	Hordeum vulgare	Contig12033	-	-	1e-11	At1g13960	WRKY4	O.I.	C.G.	S.X.
0.05	1e-3	46	Os12g0102300	Oryza sativa	AY341860.1	-	WRKY transcription factor 57	3e-3	At5g07100	WRKY26	O.I.	C.G.	S.X.
0.09	1e-18	95	PtpAffx.209136.1.S1_at	Populus trichocarpa	pmrna18087	hypothetical protein	-	6e-33	At1g13960	WRKY4	O.I.	C.G.	S.X.
0.08	8e-16	85	Ta.29394.1.S1_at	Triticum aestivum	CK207466	-	-	4e-16	At2g37260	TTG2 (TRANSPARENT TESTA GLABRA 2)	O.I.	C.G.	S.X.
0.06	2e-4	46	1620383_at	Vitis vinifera	CD715703	-	-	2e-21	At1g29860	WRKY71	O.I.	C.G.	S.X.
0.02	1e+0	34	ZmAffx.795.1.A1_at	Zea mays	AI770340	-	-	3e-3	At5g46350	WRKY8	O.I.	C.G.	S.X.

Gene ID	At2g37260
Gene name	TTG2 (TRANSPARENT TESTA GLABRA 2)
Functional description	Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.