Homology analysis

Gene ID At2g36990
Gene name SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)
Functional description Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-138At1g55020841944LOX1lipoxygenase, a defense gene conferring resistance Xanthomonas campestrisO.I.C.G.S.X.
0.018e-136At5g41140834116unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.S.X.
0.018e-136At4g15470827218-F:unknown;P:unknown;C:unknown;BOMPFVO.I.C.G.S.X.
0.018e-136At3g07940819985zinc finger and C2 domain protein, putativeF:ARF GTPase activator activity, zinc ion binding;P:regulation of ARF GTPase activity;C:cellular_component unknown;MPFOO.I.C.G.S.X.
0.013e+034At5g61060836227HDA05 (HISTONE DEACETYLASE 5)Encodes a member of the histone deacetylase family.O.I.C.G.S.X.
0.003e+034At5g24350832505-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.C.G.S.X.
0.013e+034At5g62580836379bindingF:binding;P:biological_process unknown;C:cellular_component unknown;POBMO.I.C.G.S.X.
0.013e+034At5g19630832083unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BOPAFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.075e-344GmaAffx.69339.3.S1_atGlycine maxBQ272709--1e-3At2g36990SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)O.I.C.G.S.X.
0.021e-138Contig217_atHordeum vulgareContig217--7e-31At3g52300ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)O.I.C.G.S.X.
0.022e+036OsAffx.31294.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.093e-757PtpAffx.17540.4.S1_atPopulus trichocarpaCX168071--1e-7At2g36990SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)O.I.C.G.S.X.
0.023e+034TaAffx.80631.1.S1_atTriticum aestivumCA694604--9e-1At2g39520unknown proteinO.I.C.G.S.X.
0.021e+0341619749_atVitis viniferaCF513129--1e+0At5g17550PEX19-2O.I.C.G.S.X.
0.016e+032Zm.19181.2.S1_a_atZea maysCF634947--4e-3At3g56900aladin-related / adracalin-relatedO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage