Homology analysis

Gene ID At2g35930
Gene name PUB23 (PLANT U-BOX 23)
Functional description Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.737e-81301At3g52450824410PUB22 (PLANT U-BOX 22)Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.S.X.
0.034e-240At3g11840820357PUB24 (PLANT U-BOX 24)Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.S.X.
0.016e-136At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAO.I.C.G.S.X.
0.016e-136At2g15020815991unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.016e-136At1g64710842779alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAVO.I.C.G.S.X.
0.022e+034At5g23310832395FSD3 (FE SUPEROXIDE DISMUTASE 3)Fe superoxide dismutaseO.I.C.G.S.X.
0.012e+034At5g03160831917ATP58IPK (ARABIDOPSIS HOMOLOG OF MAMALLIAN P58IPK)J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.O.I.C.G.S.X.
0.012e+034At5g56290835728PEX5 (PEROXIN 5)Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.056e-240GmaAffx.61790.1.S1_atGlycine maxAI966188--1e-3At3g52450PUB22 (PLANT U-BOX 22)O.I.C.G.S.X.
0.025e+032HK03P05r_atHordeum vulgareHK03P05r--4e-3At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.C.G.S.X.
0.022e-242Os02g0539200Oryza sativaAK108494.1-U box domain containing protein9e-4At2g48120PAC (PALE CRESS)O.I.C.G.S.X.
0.081e-242PtpAffx.206422.1.S1_s_atPopulus trichocarpapmrna12755hypothetical protein-1e-2At2g35930PUB23 (PLANT U-BOX 23)O.I.C.G.S.X.
0.043e+034TaAffx.51074.1.S1_atTriticum aestivumCA731412--9e-2At2g28830binding / structural constituent of ribosome / ubiquitin-protein ligaseO.I.C.G.S.X.
0.027e-1341621046_atVitis viniferaCF204463.1--1e-18At3g46440UXS5O.I.C.G.S.X.
0.021e+034Zm.14383.1.A1_atZea maysAY109259.1--1e+0At2g33780VQ motif-containing proteinO.I.C.G.S.X.

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