CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.32	1e-17	91	At5g44930	834523	ARAD2 (ARABINAN DEFICIENT 2)	Encodes a putative arabinosyltransferase.	O.I.	C.G.	S.X.
0.02	4e-2	40	At4g11100	826711	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPAV	O.I.	C.G.	S.X.
0.01	4e-2	40	At3g53110	824477	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.	O.I.	C.G.	S.X.
0.02	4e-2	40	At3g53310	824499	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MBOFPV	O.I.	C.G.	S.X.
0.01	2e-1	38	At5g19400	832060	SMG7	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	S.X.
0.01	2e-1	38	At5g10770	830944	chloroplast nucleoid DNA-binding protein, putative	F:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOB	O.I.	C.G.	S.X.
0.01	2e-1	38	At5g54200	835508	WD-40 repeat family protein	F:signal transducer activity;P:signal transduction;C:heterotrimeric G-protein complex;MFBOPAV	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.02	6e-2	40	Gma.9947.1.S1_at	Glycine max	BF324269	-	-	1e-4	At5g63350	unknown protein	O.I.	C.G.	S.X.
0.03	1e+0	34	Contig9796_at	Hordeum vulgare	Contig9796	-	-	5e-2	At1g47970	unknown protein	O.I.	C.G.	S.X.
0.06	8e-2	40	Os07g0567000	Oryza sativa	NM_186358.1	-	Exostosin-like family protein	4e-2	At2g35100	ARAD1 (ARABINAN DEFICIENT 1)	O.I.	C.G.	S.X.
0.11	1e-15	85	PtpAffx.63326.1.A1_at	Populus trichocarpa	CV244522	hypothetical protein	-	5e-16	At2g35100	ARAD1 (ARABINAN DEFICIENT 1)	O.I.	C.G.	S.X.
0.02	3e+0	34	TaAffx.6605.1.S1_at	Triticum aestivum	CA682009	-	-	3e-4	At4g19100	unknown protein	O.I.	C.G.	S.X.
0.03	2e-1	36	1610908_at	Vitis vinifera	CF515504	hypothetical protein LOC100250738	-	1e+0	At2g18320	-	O.I.	C.G.	S.X.
0.02	5e+0	32	ZmAffx.1050.1.A1_at	Zea mays	AI881808	-	-	3e+0	At4g35025	unknown protein	O.I.	C.G.	S.X.

Gene ID	At2g35100
Gene name	ARAD1 (ARABINAN DEFICIENT 1)
Functional description	Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.