CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At2g34560

Gene name katanin, putative

Functional description F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:unknown;OBMFPAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.03	2e-7	57	At4g27680	828882	MSP1 protein, putative / intramitochondrial sorting protein, putative	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OBMFPAV	O.I.	C.G.	S.X.
0.02	2e-7	57	At4g24860	828589	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:chloroplast;BOMFPAV	O.I.	C.G.	S.X.
0.03	4e-5	50	At5g58290	835941	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,	O.I.	C.G.	S.X.
0.02	2e-4	48	At2g30950	817646	VAR2 (VARIEGATED 2)	Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.	O.I.	C.G.	S.X.
0.02	2e-4	48	At1g06430	837154	FTSH8	encodes a FtsH protease that is localized to the chloroplast	O.I.	C.G.	S.X.
0.01	2e-3	44	At4g02480	827979	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:chloroplast;OBMFPAV	O.I.	C.G.	S.X.
0.03	9e-3	42	At5g53540	835436	MSP1 protein, putative / intramitochondrial sorting protein, putative	F:in 6 functions;P:proteolysis;C:endomembrane system;BOMFPAV	O.I.	C.G.	S.X.
0.02	9e-3	42	At1g62130	842509	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:chloroplast;OBMFPAV	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.42	3e-59	230	GmaAffx.1055.2.S1_at	Glycine max	BE347580	-	-	5e-54	At2g34560	katanin, putative	O.I.	C.G.	S.X.
0.04	3e-7	56	Contig7960_at	Hordeum vulgare	Contig7960	-	-	5e-51	At4g02480	AAA-type ATPase family protein	O.I.	C.G.	S.X.
0.31	8e-45	182	Os01g0673500	Oryza sativa	AK069899.1	-	Katanin	6e-45	At2g34560	katanin, putative	O.I.	C.G.	S.X.
0.38	3e-28	127	PtpAffx.157374.1.S1_a_at	Populus trichocarpa	CK091516	hypothetical protein	-	2e-28	At2g34560	katanin, putative	O.I.	C.G.	S.X.
0.31	5e-29	129	TaAffx.112168.1.S1_at	Triticum aestivum	CA626462	-	-	2e-29	At2g34560	katanin, putative	O.I.	C.G.	S.X.
0.38	3e-77	287	1608494_at	Vitis vinifera	CF603964	hypothetical protein LOC100253260	-	1e-76	At2g34560	katanin, putative	O.I.	C.G.	S.X.
0.30	4e-34	145	Zm.14474.1.S1_a_at	Zea mays	CD001875	hypothetical protein LOC100273044	-	1e-33	At2g34560	katanin, putative	O.I.	C.G.	S.X.

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