CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.50	2e-58	226	At1g06040	837113	STO (SALT TOLERANCE)	Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.	O.I.	C.G.	S.X.
0.09	1e-3	44	At4g10240	826615	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POM	O.I.	C.G.	S.X.
0.01	4e-1	36	At3g27260	822345	GTE8	Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain	O.I.	C.G.	S.X.
0.01	4e-1	36	At3g16940	820950	calmodulin-binding protein	F:transcription regulator activity, calmodulin binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVA	O.I.	C.G.	S.X.
0.01	1e+0	34	At4g04540	825785	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	S.X.
0.01	1e+0	34	At1g55130	841956	endomembrane protein 70, putative	F:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFB	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.11	2e-6	54	Gma.7484.1.S1_a_at	Glycine max	CD412952	salt-tolerance protein	-	3e-6	At2g31380	STH	O.I.	C.G.	S.X.
0.05	7e-4	44	Contig6358_at	Hordeum vulgare	Contig6358	-	-	6e-4	At1g06040	STO (SALT TOLERANCE)	O.I.	C.G.	S.X.
0.04	3e+0	34	OsAffx.30821.1.S1_at	Oryza sativa	-	-	-	0			O.I.	C.G.	S.X.
0.20	9e-15	81	PtpAffx.5282.2.S1_s_at	Populus trichocarpa	CX184225	hypothetical protein	-	9e-14	At1g06040	STO (SALT TOLERANCE)	O.I.	C.G.	S.X.
0.04	2e-2	40	Ta.27094.1.S1_at	Triticum aestivum	BT009289.1	-	-	2e-4	At1g06040	STO (SALT TOLERANCE)	O.I.	C.G.	S.X.
0.11	7e-9	59	1618741_at	Vitis vinifera	CF208732	hypothetical protein LOC100257595	-	1e-10	At1g06040	STO (SALT TOLERANCE)	O.I.	C.G.	S.X.
0.03	9e+0	30	ZmAffx.729.1.S1_at	Zea mays	AI740018	-	-	2e-4	At4g02450	glycine-rich protein	O.I.	C.G.	S.X.

Gene ID	At2g31380
Gene name	STH
Functional description	a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction.