Homology analysis

Gene ID At2g27100
Gene name SE (SERRATE)
Functional description Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.021e-346At3g09770820135zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:plasma membrane;MPOFVBAO.I.C.G.S.X.
0.027e-240At3g55790824745unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPBOFVO.I.C.G.S.X.
0.013e-138At3g56940824861CRD1 (COPPER RESPONSE DEFECT 1)Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.O.I.C.G.S.X.
0.013e-138At3g60870825258DNA-binding protein-relatedF:unknown;P:unknown;C:unknown;PBO.I.C.G.S.X.
0.013e-138At2g35860818159FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)F:unknown;P:cell adhesion;C:endomembrane system;BMPOFAVO.I.C.G.S.X.
0.011e+036At5g53730835454harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.011e+036At5g25590832634-F:unknown;P:N-terminal protein myristoylation;C:unknown;MOFPBVAO.I.C.G.S.X.
0.011e+036At5g17420831608IRX3 (IRREGULAR XYLEM 3)Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.102e-21105GmaAffx.13991.1.A1_atGlycine maxBU547216--6e-22At2g27100SE (SERRATE)O.I.C.G.S.X.
0.111e-1791Contig9505_atHordeum vulgareContig9505--2e-17At2g27100SE (SERRATE)O.I.C.G.S.X.
0.136e-1067Os.38989.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.243e-57224PtpAffx.204416.1.S1_atPopulus trichocarpapmrna8683hypothetical protein-1e-57At2g27100SE (SERRATE)O.I.C.G.S.X.
0.063e-1067Ta.1307.3.S1_atTriticum aestivumCA613138--5e-11At2g27100SE (SERRATE)O.I.C.G.S.X.
0.012e-2401616071_atVitis viniferaCB978649hypothetical protein LOC100259260-5e-58At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.C.G.S.X.
0.136e-1685Zm.15823.1.A1_atZea maysAI691486C2H2 zinc-finger protein-9e-16At2g27100SE (SERRATE)O.I.C.G.S.X.



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