Homology analysis

Gene ID At2g23130
Functional description AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.082e-240At4g37450829900AGP18 (ARABINOGALACTAN PROTEIN 18)AGP18 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP17 and AGP19, other lysine-rich AGPs. It is expressed in young leaves, shoots, roots and flowers.O.I.C.G.S.X.
0.022e-240At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAO.I.C.G.S.X.
0.017e-238At5g11530831025EMF1 (embryonic flower 1)Involved in regulating reproductive developmentO.I.C.G.S.X.
0.047e-238At4g35750829728Rho-GTPase-activating protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.S.X.
0.037e-238At4g28100828926unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;PO.I.C.G.S.X.
0.013e-136At4g04220825737AtRLP46 (Receptor Like Protein 46)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.S.X.
0.023e-136At1g56110842063NOP56 (Arabidopsis homolog of nucleolar protein Nop56)NOP56-like proteinO.I.C.G.S.X.
0.021e+034At5g14140831264zinc finger (C2H2 type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:endomembrane system, intracellular;MFPOO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.044e-136GmaAffx.65756.1.S1_atGlycine maxBF598384--2e-3At5g64430octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.C.G.S.X.
0.042e+032Contig19331_atHordeum vulgareContig19331--3e+0At1g67210proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinO.I.C.G.S.X.
0.052e+034OsAffx.27797.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.052e+034PtpAffx.202139.1.S1_atPopulus trichocarpapmrna4274hypothetical protein-2e-12At1g07820histone H4O.I.C.G.S.X.
0.044e+032TaAffx.79559.1.S1_x_atTriticum aestivumCA713054--1e+1At3g22580protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.S.X.
0.031e+0321620945_atVitis viniferaCF568893--2e-1At3g45140LOX2 (LIPOXYGENASE 2)O.I.C.G.S.X.
0.058e-340Zm.7010.3.S1_atZea maysAI691447--5e-2At2g32100OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)O.I.C.G.S.X.

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