Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | At2g22540 |
| Gene name | SVP (SHORT VEGETATIVE PHASE) |
| Functional description | Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.23 | 4e-19 | 95 | At4g24540 | 828556 | AGL24 (AGAMOUS-LIKE 24) | Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain. | O.I. | C.G. | S.X. | |
| 0.08 | 6e-6 | 52 | At5g60910 | 836212 | AGL8 (agamous-like 8) | MADS box gene negatively regulated by APETALA1 | O.I. | C.G. | S.X. | |
| 0.13 | 6e-6 | 52 | At4g37940 | 829950 | AGL21 | encodes a MADS box protein, highly expressed in the root. | O.I. | C.G. | S.X. | |
| 0.07 | 2e-5 | 50 | At2g22630 | 816794 | AGL17 (agamous-like 17) | Encodes a MADs domain containing protein involved in promoting flowering. Loss of function mutations show delayed flowering in long days and reduced levels of LFY and AP1 expression. | O.I. | C.G. | S.X. | |
| 0.07 | 4e-4 | 46 | At2g45650 | 819173 | AGL6 (AGAMOUS-LIKE 6) | sequence suggests this encodes a MADS-box transcription factor | O.I. | C.G. | S.X. | |
| 0.04 | 6e-3 | 42 | At3g57390 | 824906 | AGL18 | encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos. | O.I. | C.G. | S.X. | |
| 0.06 | 2e-2 | 40 | At1g26310 | 839172 | CAL (CAULIFLOWER) | Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants. | O.I. | C.G. | S.X. | |
| 0.05 | 2e-2 | 40 | At1g72350 | 843567 | MADS-box protein (AGL60) | F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFO | O.I. | C.G. | S.X. | |
| 0.02 | 2e-2 | 40 | At1g54300 | 841871 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.13 | 1e-4 | 48 | Gma.6381.1.S1_at | Glycine max | BQ610438 | - | - | 9e-5 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.11 | 1e-2 | 40 | Contig9918_at | Hordeum vulgare | Contig9918 | - | - | 4e-2 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.11 | 2e-7 | 57 | Os02g0761000 | Oryza sativa | AB003322.1 | - | MADS transcriptional factor | 2e-7 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.30 | 2e-40 | 167 | PtpAffx.4750.1.S1_at | Populus trichocarpa | AJ767836 | hypothetical protein | - | 3e-40 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.10 | 3e-11 | 69 | Ta.6743.3.S1_at | Triticum aestivum | CA698490 | - | - | 2e-11 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.25 | 6e-28 | 123 | 1619977_at | Vitis vinifera | BQ794993 | hypothetical protein LOC100251508 | - | 3e-27 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | C.G. | S.X. | |
| 0.06 | 3e-9 | 61 | Zm.14828.1.S1_at | Zea mays | AJ430632.1 | m15 protein | - | 8e-10 | At5g60910 | AGL8 (agamous-like 8) | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage