CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At2g22230

Gene name beta-hydroxyacyl-ACP dehydratase, putative

Functional description F:3-hydroxybutyryl-[acyl-carrier-protein] dehydratase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast;BOPM

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.45	1e-59	230	At5g10160	830880	beta-hydroxyacyl-ACP dehydratase, putative	F:hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast, membrane;BOPM	O.I.	C.G.	S.X.
0.01	8e-2	38	At3g47580	823912	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	S.X.
0.03	3e-1	36	At4g01640	828177	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	S.X.
0.02	3e-1	36	At2g34280	817989	S locus F-box-related / SLF-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	S.X.
0.03	3e-1	36	At1g51390	841563	NFU5	Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU4 than to NFU1,2, and 3. Targeted to the mitochondrion.	O.I.	C.G.	S.X.
0.01	3e-1	36	At1g65440	842855	GTB1	Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.	O.I.	C.G.	S.X.
0.02	1e+0	34	At5g64280	836549	DiT2.2 (dicarboxylate transporter 2.2)	F:oxoglutarate:malate antiporter activity;P:malate transport, sodium ion transport;C:chloroplast, membrane;BOPAFMV	O.I.	C.G.	S.X.
0.01	1e+0	34	At2g40030	818591	NRPD1B	Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.33	5e-38	159	Gma.9081.1.S1_at	Glycine max	CA803057	-	-	2e-22	At5g10160	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.25	9e-28	123	Contig9102_at	Hordeum vulgare	Contig9102	-	-	3e-27	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.37	9e-31	135	Os05g0435700	Oryza sativa	AK069677.1	-	(3R)-hydroxymyristoyl-[acyl carrier protein]dehydratase (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACPdehydrase)	7e-31	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.33	5e-47	188	PtpAffx.163022.1.S1_s_at	Populus trichocarpa	CX175629	hypothetical protein	-	2e-43	At5g10160	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.36	7e-21	101	Ta.28307.1.S1_s_at	Triticum aestivum	BJ266961	-	-	1e-20	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.30	1e-25	115	1614467_at	Vitis vinifera	CA818630	hypothetical protein LOC100266972	-	7e-25	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.
0.28	4e-20	97	Zm.11729.1.A1_at	Zea mays	CF635461	hypothetical protein LOC100273566	-	2e-19	At2g22230	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	C.G.	S.X.

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