CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At2g18800

Gene name XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21)

Functional description F:hydrolase activity, acting on glycosyl bonds, xyloglucan endotransglucosylase activity;P:primary root development, cell wall modification;C:endomembrane system, apoplast, cell wall;PFBO

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.20	6e-19	95	At5g57560	835860	TCH4 (Touch 4)	Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli	O.I.	C.G.	S.X.
0.22	4e-17	89	At4g30270	829150	MERI5B (meristem-5)	encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.	O.I.	C.G.	S.X.
0.29	2e-12	73	At5g57550	835859	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	xyloglucan endotransglycosylase-related protein (XTR3)	O.I.	C.G.	S.X.
0.07	1e-7	57	At4g30290	829152	XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19)	putative xyloglucan endotransglycosylase/hydrolase, expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.	O.I.	C.G.	S.X.
0.19	3e-5	50	At4g25810	828686	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	xyloglucan endotransglycosylase-related protein (XTR6)	O.I.	C.G.	S.X.
0.03	5e-4	46	At1g14720	838037	XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)	member of Glycoside Hydrolase Family 16	O.I.	C.G.	S.X.
0.12	2e-3	44	At4g14130	827051	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	xyloglucan endotransglycosylase-related protein (XTR7)	O.I.	C.G.	S.X.
0.09	7e-3	42	At5g48070	834859	XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20)	putative xyloglucan endotransglycosylase/hydrolase, expressed primarily in the stele of mature non-elongating regions of both the main and the lateral root. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.	O.I.	C.G.	S.X.
0.04	7e-3	42	At5g57530	835857	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	F:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:cell wall, cytoplasm;PFBO	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.12	2e-10	67	Gma.16471.1.S1_at	Glycine max	BQ298739	-	-	8e-19	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	O.I.	C.G.	S.X.
0.06	1e-3	44	Contig2671_at	Hordeum vulgare	Contig2671	-	-	4e-8	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	C.G.	S.X.
0.07	6e-5	50	Os06g0696400	Oryza sativa	AK104912.1	-	Xyloglycan endo-transglycosylase precursor	7e-10	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	O.I.	C.G.	S.X.
0.13	2e-22	107	PtpAffx.214395.1.S1_at	Populus trichocarpa	pmrna28007	hypothetical protein	-	2e-24	At4g30270	MERI5B (meristem-5)	O.I.	C.G.	S.X.
0.03	1e-1	38	TaAffx.30865.1.S1_s_at	Triticum aestivum	CA621506	-	-	4e+0	At3g17261	unknown protein	O.I.	C.G.	S.X.
0.17	6e-7	54	1619068_at	Vitis vinifera	CF215954	hypothetical protein LOC100250461	-	1e-13	At4g14130	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	O.I.	C.G.	S.X.
0.03	8e-1	34	Zm.5108.1.A1_at	Zea mays	AI600869	xyloglucan endotransglucosylase/hydrolase protein 23	-	1e-3	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	O.I.	C.G.	S.X.

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