Homology analysis

Gene ID At2g15580
Gene name zinc finger (C3HC4-type RING finger) family protein
Functional description F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFBV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.011e+034At5g01270831743CPL2Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.O.I.C.G.S.X.
0.021e+034At1g10510837591emb2004 (embryo defective 2004)F:unknown;P:embryonic development ending in seed dormancy;C:mitochondrion, chloroplast, plastid, chloroplast envelope;MOBPFO.I.C.G.S.X.
0.025e+032At5g01370831905unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMFBPVO.I.C.G.S.X.
0.015e+032At5g45300834566BMY2 (BETA-AMYLASE 2)F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:cellular_component unknown;PMBOFO.I.C.G.S.X.
0.015e+032At3g63460825521WD-40 repeat family proteinF:molecular_function unknown;P:unknown;C:CUL4 RING ubiquitin ligase complex, membrane;MFOBPVAO.I.C.G.S.X.
0.015e+032At3g57980824967DNA-binding bromodomain-containing proteinF:DNA binding;P:unknown;C:unknown;MOFPBVAO.I.C.G.S.X.
0.015e+032At2g36910818265ABCB1 (ATP BINDING CASSETTE SUBFAMILY B1)Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e+034GmaAffx.23216.1.S1_atGlycine maxBI788317--3e-9At1g30300unknown proteinO.I.C.G.S.X.
0.032e+032EBem06_SQ004_E07_s_atHordeum vulgareEBem06_SQ004_E07--3e+0At4g15140unknown proteinO.I.C.G.S.X.
0.032e+034Os03g0749400Oryza sativa9631.m05285-Conserved hypothetical protein9e-1At2g15580zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.032e+034PtpAffx.210043.1.S1_atPopulus trichocarpapmrna19784hypothetical protein-2e-5At2g36690oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.S.X.
0.038e-238TaAffx.95810.1.S1_atTriticum aestivumCA609147--7e-2At2g15580zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.043e-1341609779_atVitis viniferaCB974043hypothetical protein LOC100264483-1e+0At3g61230LIM domain-containing proteinO.I.C.G.S.X.
0.038e+030Zm.9603.1.A1_atZea maysBM341305--1e+0At4g15715-O.I.C.G.S.X.



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