Homology analysis

Gene ID At1g75520
Gene name SRS5 (SHI-RELATED SEQUENCE 5)
Functional description A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.358e-37155At1g19790838567SRS7 (SHI-RELATED SEQUENCE 7)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.O.I.C.G.S.X.
0.131e-23111At3g51060824270STY1 (STYLISH 1)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves.O.I.C.G.S.X.
0.142e-1687At5g33210833279SRS8 (SHI-RELATED SEQUENCE 8)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. SRS8 is a putative pseudogene.O.I.C.G.S.X.
0.136e-1685At5g66350836767SHI (SHORT INTERNODES)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.O.I.C.G.S.X.
0.169e-1271At2g21400816679SRS3 (SHI-RELATED SEQUENCE3)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.O.I.C.G.S.X.
0.109e-652At4g36260829783STY2 (STYLISH 2)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style, stigma as well as serrated leaves.O.I.C.G.S.X.
0.063e-550At3g54430824609SRS6 (SHI-RELATED SEQUENCE 6)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.O.I.C.G.S.X.
0.101e-448At5g12330831108LRP1 (LATERAL ROOT PRIMORDIUM 1)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.051e-242GmaAffx.17471.1.S1_atGlycine maxBE821474--4e-3At1g75520SRS5 (SHI-RELATED SEQUENCE 5)O.I.C.G.S.X.
0.036e-238Contig26118_s_atHordeum vulgareContig26118--1e+0At5g36280-O.I.C.G.S.X.
0.027e-240Os04g0489600Oryza sativaAK062301.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein9e-1At1g72080unknown proteinO.I.C.G.S.X.
0.232e-26121PtpAffx.205806.1.S1_x_atPopulus trichocarpapmrna11477hypothetical protein-4e-27At1g75520SRS5 (SHI-RELATED SEQUENCE 5)O.I.C.G.S.X.
0.033e-240TaAffx.79383.1.S1_atTriticum aestivumCA716967--6e-2At1g49010myb family transcription factorO.I.C.G.S.X.
0.021e-2401610038_atVitis viniferaCF516172hypothetical protein LOC100262968-2e-11At5g21280hydroxyproline-rich glycoprotein family proteinO.I.C.G.S.X.
0.022e-136Zm.17909.1.S1_atZea maysCN844147--3e-1At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)O.I.C.G.S.X.



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