Homology analysis

Gene ID At1g71692
Gene name AGL12 (AGAMOUS-LIKE 12)
Functional description Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.095e-652At1g26310839172CAL (CAULIFLOWER)Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants.O.I.C.G.S.X.
0.098e-548At2g03710814898SEP4 (SEPALLATA 4)This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.O.I.C.G.S.X.
0.093e-446At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.S.X.
0.082e-240At5g23260832390TT16 (TRANSPARENT TESTA16)Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule.O.I.C.G.S.X.
0.042e-240At4g21050827852Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.091e-448GmaAffx.70788.1.S1_atGlycine maxAI959798--8e-35At2g03710SEP4 (SEPALLATA 4)O.I.C.G.S.X.
0.126e-444Contig14348_atHordeum vulgareContig14348--3e-3At1g71692AGL12 (AGAMOUS-LIKE 12)O.I.C.G.S.X.
0.086e-136OsAffx.4301.2.S1_atOryza sativa---0O.I.C.G.S.X.
0.128e-961PtpAffx.212345.1.S1_s_atPopulus trichocarpapmrna24196hypothetical protein-5e-9At1g71692AGL12 (AGAMOUS-LIKE 12)O.I.C.G.S.X.
0.073e-446Ta.26215.2.S1_s_atTriticum aestivumCA640069MIKC-type MADS-box transcription factor WM12-3e-4At1g71692AGL12 (AGAMOUS-LIKE 12)O.I.C.G.S.X.
0.059e-2361612606_atVitis viniferaAF373602.1MADS-box protein 3-7e-31At2g03710SEP4 (SEPALLATA 4)O.I.C.G.S.X.
0.051e-136Zm.5851.6.S1_x_atZea maysL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)O.I.C.G.S.X.

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