Homology analysis

Gene ID At1g67230
Gene name LINC1 (LITTLE NUCLEI1)
Functional description Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.011e-140At4g11920826799CCS52A2Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication.O.I.C.G.S.X.
0.014e-138At5g17740831642AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVO.I.C.G.S.X.
0.014e-138At4g40020830163unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.S.X.
0.014e-138At3g15950820839NAI2Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies.O.I.C.G.S.X.
0.014e-138At3g05310819695MIRO3Encodes a protein with similarity to MIRO GTPases.O.I.C.G.S.X.
0.014e-138At3g14240820644subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.S.X.
0.014e-138At1g20550838643unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.S.X.
0.014e-138At1g50450841467binding / catalyticF:binding, catalytic activity;P:metabolic process;C:chloroplast;BOFMPAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.036e-138GmaAffx.79265.1.S1_atGlycine maxCA801926--6e-2At1g67230LINC1 (LITTLE NUCLEI1)O.I.C.G.S.X.
0.018e-136Contig8717_atHordeum vulgareContig8717--2e-19At2g15240UNC-50 family proteinO.I.C.G.S.X.
0.015e-242Os01g0282400Oryza sativaNM_187704.1--2e+1At5g25280serine-rich protein-relatedO.I.C.G.S.X.
0.158e-22107PtpAffx.143705.4.S1_s_atPopulus trichocarpaCV231301hypothetical protein-1e-22At1g67230LINC1 (LITTLE NUCLEI1)O.I.C.G.S.X.
0.011e-140Ta.2916.1.A1_atTriticum aestivumBJ207197--1e+0At3g59052CPuORF18 (Conserved peptide upstream open reading frame 18)O.I.C.G.S.X.
0.059e-9611616795_atVitis viniferaCA813984hypothetical LOC100248029-4e-9At1g67230LINC1 (LITTLE NUCLEI1)O.I.C.G.S.X.
0.011e-242Zm.5787.1.A1_atZea maysAI714879--1e-5At2g17390AKR2B (ANKYRIN REPEAT-CONTAINING 2B)O.I.C.G.S.X.



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