Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | At1g66530 |
| Gene name | arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative |
| Functional description | F:aminoacyl-tRNA ligase activity, nucleotide binding, arginine-tRNA ligase activity, ATP binding;P:arginyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;OBMAFPV |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.85 | 0 | 2030 | At4g26300 | 828736 | emb1027 (embryo defective 1027) | F:nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, arginyl-tRNA aminoacylation;C:mitochondrion, chloroplast;OBMAFPV | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At4g10930 | 826692 | unknown protein | F:unknown;P:unknown;C:cellular_component unknown;MOFBP | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At3g22450 | 821816 | structural constituent of ribosome | F:structural constituent of ribosome;P:translation;C:mitochondrion, ribosome, intracellular;PBOM | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g52882 | 5008305 | ATP binding / nucleoside-triphosphatase/ nucleotide binding | F:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAV | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g55740 | 835668 | CRR21 (chlororespiratory reduction 21) | Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity. | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g23570 | 832422 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g58380 | 835951 | SIP1 (SOS3-INTERACTING PROTEIN 1) | Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At4g14570 | 827104 | acylaminoacyl-peptidase-related | F:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;BOMFPA | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At4g35970 | 829751 | APX5 (ASCORBATE PEROXIDASE 5) | Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.16 | 2e-8 | 61 | Gma.10893.1.S1_at | Glycine max | BE659457 | arginyl-tRNA synthetase | - | 7e-20 | At4g26300 | emb1027 (embryo defective 1027) | O.I. | C.G. | S.X. | |
| 0.18 | 1e-22 | 107 | Contig9377_at | Hordeum vulgare | Contig9377 | - | - | 4e-27 | At4g26300 | emb1027 (embryo defective 1027) | O.I. | C.G. | S.X. | |
| 0.20 | 9e-18 | 93 | Os05g0163000 | Oryza sativa | AK066161.1 | - | Arginyl-tRNA synthetase, class Ic family protein | 2e-20 | At4g26300 | emb1027 (embryo defective 1027) | O.I. | C.G. | S.X. | |
| 0.31 | 6e-18 | 93 | Ptp.1743.1.A1_a_at | Populus trichocarpa | CV271562 | hypothetical protein | - | 3e-45 | At4g26300 | emb1027 (embryo defective 1027) | O.I. | C.G. | S.X. | |
| 0.21 | 1e-18 | 95 | Ta.2176.1.S1_at | Triticum aestivum | CK206562 | - | - | 1e-25 | At4g26300 | emb1027 (embryo defective 1027) | O.I. | C.G. | S.X. | |
| 0.02 | 3e-1 | 36 | 1611954_at | Vitis vinifera | CF516533 | hypothetical protein LOC100250957 | - | 1e+0 | At4g08260 | protein phosphatase 2C, putative / PP2C, putative | O.I. | C.G. | S.X. | |
| 0.09 | 2e-6 | 54 | Zm.7543.1.A1_at | Zea mays | CD997722 | hypothetical protein LOC100192002 | - | 4e-6 | At1g66530 | arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage