Homology analysis

Gene ID At1g62940
Gene name ACOS5 (ACYL-COA SYNTHETASE 5)
Functional description encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.032e-1067At4g051608258644-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putativeEncodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.O.I.C.G.S.X.
0.079e-1065At1g516808415934CL1 (4-COUMARATE:COA LIGASE 1)encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.O.I.C.G.S.X.
0.041e-552At1g650608428144CL3encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.O.I.C.G.S.X.
0.025e-240At5g381208337924-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinF:4-coumarate-CoA ligase activity;P:metabolic process;C:unknown;BOFMPAVO.I.C.G.S.X.
0.015e-240At2g31770817734zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVO.I.C.G.S.X.
0.012e-138At5g40720834072-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOFMO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.063e-757Gma.4928.1.S1_a_atGlycine maxAF002259.14-coumarate:CoA ligase isoenzyme 2-4e-9At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.034e-446Contig4674_atHordeum vulgareContig4674--5e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.041e-450Os03g0152400Oryza sativaCR279600-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment)6e-12At4g051604-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putativeO.I.C.G.S.X.
0.205e-1583PtpAffx.200226.1.S1_atPopulus trichocarpapmrna425acyl:coa ligase-4e-15At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.
0.071e-552Ta.3609.3.S1_a_atTriticum aestivumBJ208086--5e-6At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.
0.044e-3421606753_atVitis viniferaCF403699hypothetical protein LOC100267198-2e-23At4g051604-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putativeO.I.C.G.S.X.
0.023e-136Zm.1074.1.A1_atZea maysCF631708--1e+0At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.



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