CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At1g62740

Gene name stress-inducible protein, putative

Functional description F:binding;P:response to stress;C:cytosol, nucleus, plasma membrane;OBMPFAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.72	0	819	At1g12270	837781	stress-inducible protein, putative	F:binding;P:response to stress;C:unknown;OMBPFAV	O.I.	C.G.	S.X.
0.54	4e-80	299	At4g12400	826849	stress-inducible protein, putative	F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV	O.I.	C.G.	S.X.
0.02	9e-7	56	At2g24060	816940	translation initiation factor 3 (IF-3) family protein	F:translation initiation factor activity;P:translational initiation;C:chloroplast;OBMPFVA	O.I.	C.G.	S.X.
0.01	1e-2	42	At3g61570	825330	GDAP1 (GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING ARABIDOPSIS PROTEIN 1)	This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC3 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (161 aa) portion of the protein.	O.I.	C.G.	S.X.
0.01	1e-2	42	At2g40030	818591	NRPD1B	Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.	O.I.	C.G.	S.X.
0.01	2e-1	38	At5g45600	834599	GAS41	The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.	O.I.	C.G.	S.X.
0.01	2e-1	38	At4g37210	829875	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MFOPBVA	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.35	2e-61	238	Gma.8435.1.S1_at	Glycine max	X79770.1	stress inducible protein	-	1e-61	At1g62740	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.38	1e-41	171	Contig7425_at	Hordeum vulgare	Contig7425	-	-	2e-41	At1g62740	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.26	1e-32	143	Os02g0644100	Oryza sativa	AK102431.1	-	Heat shock protein STI (Stress inducible protein)(GmSTI)	6e-33	At1g62740	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.46	7e-73	276	PtpAffx.215660.1.S1_s_at	Populus trichocarpa	pmrna29980	hypothetical protein	-	1e-64	At4g12400	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.14	1e-9	65	Ta.8679.1.S1_x_at	Triticum aestivum	CK157404	-	-	1e-9	At1g62740	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.30	3e-56	218	1618545_a_at	Vitis vinifera	CB346750	hypothetical LOC100265979	-	2e-50	At1g12270	stress-inducible protein, putative	O.I.	C.G.	S.X.
0.24	5e-25	115	Zm.2497.1.S1_at	Zea mays	AY107480.1	hypothetical protein LOC100272917	-	3e-55	At4g12400	stress-inducible protein, putative	O.I.	C.G.	S.X.

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